gov.noaa.nodc:0073540
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2024-03-08T13:20:34Z
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Environmental properties and microbial communities in coastal waters of Barrow, Alaska from 2007-07-11 to 2009-01-14 (NCEI Accession 0073540)
2011-06-13
publication
NOAA National Centers for Environmental Information
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0073540
NOAA National Centers for Environmental Information
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David Kirchman
University of Delaware; College of Earth, Ocean, and Environment; School of Marine Science and Policy
kirchman@udel.edu
http://www.ceoe.udel.edu/schools-departments/school-of-marine-science-and-policy
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University of Delaware; College of Earth, Ocean, and Environment; School of Marine Science and Policy website
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University of Delaware; College of Earth, Ocean, and Environment; School of Marine Science and Policy
http://www.ceoe.udel.edu/schools-departments/school-of-marine-science-and-policy
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University of Delaware; College of Earth, Ocean, and Environment; School of Marine Science and Policy website
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University of Delaware; College of Earth, Ocean, and Environment; School of Marine Science and Policy
http://www.ceoe.udel.edu/schools-departments/school-of-marine-science-and-policy
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Kirchman, David
University of Delaware; College of Earth, Ocean, and Environment; School of Marine Science and Policy
kirchman@udel.edu
http://www.ceoe.udel.edu/schools-departments/school-of-marine-science-and-policy
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University of Delaware/College of Earth, Ocean, and Environment > School of Marine Science and Policy
http://www.ceoe.udel.edu/schools-departments/school-of-marine-science-and-policy
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University of Delaware; College of Earth, Ocean, and Environment; School of Marine Science and Policy website
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tableDigital
The data set consists of basic water column properties of the Beaufort Sea and the Chukchi Sea near Barrow, Alaska. The environmental properties include salinity, temperature, chlorophyll a, major plant nutrients, and ice and snow cover. The microbial data included the abundance of various microbial groups, leucine incorporation, and the abundance of genes for 16S rRNA and ammonia monooxygenase (amoA). The data were collected in summer 2007, winter and summer 2008, and winter 2009.
This dataset is available to the public for a wide variety of uses including scientific research and analysis.
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0073540
NCEI ACCESSION NUMBER
2011-06-10
publication
AMMONIUM (NH4)
BACTERIA - BACTERIAL DENSITY
CHLOROPHYLL A
Ice Depth/Thickness
leucine
MICROBIOLOGY
nitrate + nitrite content (concentration)
phosphate
SALINITY
silicate
WATER TEMPERATURE
theme
NODC DATA TYPES THESAURUS
Flow Cytometer
fluorescence microscope
fluorometer
laboratory analysis
nutrient autoanalyzer
PCR machine
pump sampler
refractometer
scintillation counter
spectrophotometer
thermometer
instrument
NODC INSTRUMENT TYPES THESAURUS
biological
chemical
surface measurements
theme
NODC OBSERVATION TYPES THESAURUS
University of Delaware; College of Earth, Ocean, and Environment; School of Marine Science and Policy
dataCentre
NODC COLLECTING INSTITUTION NAMES THESAURUS
University of Delaware; College of Earth, Ocean, and Environment; School of Marine Science and Policy
dataCentre
NODC SUBMITTING INSTITUTION NAMES THESAURUS
Beaufort Sea
Chukchi Sea
place
NODC SEA AREA NAMES THESAURUS
oceanography
theme
WMO_CategoryCode
2012-09-15
publication
DOC/NOAA/NESDIS/NODC > National Oceanographic Data Center, NESDIS, NOAA, U.S. Department of Commerce
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Global Change Master Directory (GCMD) Data Center Keywords
2023
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17
Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA)
Greenbelt
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Global Change Master Directory (GCMD). 2023. GCMD Keywords, Version 17. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords
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custodian
EARTH SCIENCE > CRYOSPHERE > SEA ICE > ICE DEPTH/THICKNESS
EARTH SCIENCE > OCEANS > OCEAN CHEMISTRY > AMMONIA
EARTH SCIENCE > OCEANS > OCEAN CHEMISTRY > CHLOROPHYLL
EARTH SCIENCE > OCEANS > OCEAN CHEMISTRY > NITRATE
EARTH SCIENCE > OCEANS > OCEAN CHEMISTRY > NITRITE
EARTH SCIENCE > OCEANS > OCEAN CHEMISTRY > PHOSPHATE
EARTH SCIENCE > OCEANS > OCEAN CHEMISTRY > SILICATE
EARTH SCIENCE > OCEANS > OCEAN TEMPERATURE > WATER TEMPERATURE
EARTH SCIENCE > OCEANS > SALINITY/DENSITY > SALINITY
theme
Global Change Master Directory (GCMD) Science Keywords
2023
revision
17
Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA)
Greenbelt
MD
https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
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AUTOANALYZER > AUTOANALYZER
FLOW CYTOMETRY
FLUORESCENCE MICROSCOPY > FLUORESCENCE MICROSCOPY
FLUOROMETERS > FLUOROMETERS
OPTSPEC > Optical Spectrometer
SCINTILLATION COUNTERS > SCINTILLATION COUNTERS
THERMOMETERS > THERMOMETERS
instrument
Global Change Master Directory (GCMD) Instrument Keywords
2023
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Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA)
Greenbelt
MD
https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
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Global Change Master Directory (GCMD). 2023. GCMD Keywords, Version 17. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords
information
custodian
OCEAN > ARCTIC OCEAN > BEAUFORT SEA
OCEAN > ARCTIC OCEAN > CHUKCHI SEA
place
Global Change Master Directory (GCMD) Location Keywords
2023
revision
17
Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA)
Greenbelt
MD
https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
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GCMD Keyword Forum Page
Global Change Master Directory (GCMD). 2023. GCMD Keywords, Version 17. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords
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accessLevel: Public
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Cite as: Kirchman, David; University of Delaware/College of Earth, Ocean, and Environment > School of Marine Science and Policy (2011). Environmental properties and microbial communities in coastal waters of Barrow, Alaska from 2007-07-11 to 2009-01-14 (NCEI Accession 0073540). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0073540. Accessed [date].
Distribution liability: NOAA and NCEI make no warranty, expressed or implied, regarding these data, nor does the fact of distribution constitute such a warranty. NOAA and NCEI cannot assume liability for any damages caused by any errors or omissions in these data. If appropriate, NCEI can only certify that the data it distributes are an authentic copy of the records that were accepted for inclusion in the NCEI archives.
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Use liability: NOAA and NCEI cannot provide any warranty as to the accuracy, reliability, or completeness of furnished data. Users assume responsibility to determine the usability of these data. The user is responsible for the results of any application of this data for other than its intended purpose.
eng; USA
utf8
environment
oceans
biota
-156.8608
-156.055
71.3526
71.4483
2007-07-11
2009-01-14
National Science foundation; Arctic Sciences Division; Office of Polar Programs (OPP)
PIs: David Kirchman and Matthew Cottrell
Project Name and number: Chemolithoautotrophy in the Arctic Ocean- environmental genomics and functional analyses;OPP0632233
Publication resulting from this research:
- Christman, G.D., M.T. Cottrell, B.N. Popp, E. Gier, and D.L. Kirchman (2011) Abundance, Diversity, and Activity of Ammonia-Oxidizing Prokaryotes in the Coastal Arctic Ocean in Summer and Winter. Appl. Environ. Microbiol. 77: 2026-2034.
- Cottrell, M.T., and D.L. Kirchman (2009) Photoheterotrophic Microbes in the Arctic Ocean in Summer and Winter. Appl. Environ. Microbiol. 75: 4958-4966.
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NCEI Accession 0073540 v1.1 was published.
2011-06-13T13:40:58Z
NCEI Accession 0073540 v1.1
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NCEI Accession 0073540 v1.1
published 2011-06-13T13:40:58Z
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NOAA National Centers for Environmental Information
NOAA created the National Centers for Environmental Information (NCEI) by merging NOAA's National Climatic Data Center (NCDC), National Geophysical Data Center (NGDC), and National Oceanographic Data Center (NODC), including the National Coastal Data Development Center (NCDDC), per the Consolidated and Further Continuing Appropriations Act, 2015, Public Law 113-235. NCEI launched publicly on April 22, 2015.
2015-04-22T00:00:00
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Flow Cytometer
Flow Cytometer
A method to enumerate bacterial and phytoplankton cells in seawater and estimate their spherical diameter
Flow cytometers are laboratory based instruments used to measure cells and particles from aqueous samples. The instrument was initially developed for analysis of Human blood cells for medical purposes, but this technology was adopted by the ocean science community by several investigators, principally Penny Chischolm out of the Massachusetts Institute of Technology, in late 20th century. Since then, the technique has been broadly applied, and it is a unique measurement of microbial populations in the ocean because it provides one at a time measures of cells, to extrapolate features such as fluorescence and cell size. Flow cytometers have been adapted for a number of oceanographic applications such as ship board measurement, and more precise measurement of planktonic fractions. Additionally, the flow cytometer has been adapted for in-situ deployment (see the corresponding nodc instrument code).
fluorescence microscope
fluorescence microscope
Light Stimulating Microscope
An optical microscope used to study properties of substances using fluorescence. The specimen is illuminated with light of a specific wavelength (or wavelengths) which is absorbed, causing light of longer wavelengths to be emitted.
fluorometer
fluorometer
fluorometer
laboratory analysis
laboratory analysis
use as an observation type
nutrient autoanalyzer
nutrient autoanalyzer
Laboratory Instrument
Nutrient Autoanalyzer is a generic term describing an automated flow-thru system used to conduct analyses of several different nutrients (nitrate, ammonium, orthophosphate, and silicate) simultaneously from a seawater sample.
For example:
SEAL AutoAnalyzer 3 HR Continuous Segmented Flow Analyzer
PCR machine
PCR machine
thermal cycler, thermocycler, PCR machine, DNA amplifier
The thermal cycler (also known as a thermocycler, PCR machine or DNA amplifier) is a laboratory apparatus most commonly used to amplify segments of DNA via the polymerase chain reaction (PCR).
https://en.wikipedia.org/wiki/Thermal_cycler, 2017-05-02.
pump sampler
pump sampler
generic name for instrument that pumps water from depth to be filtered through a sieve
refractometer
refractometer
refractometer
scintillation counter
scintillation counter
measures ionizing radiation
A scintillation counter is an instrument for detecting and measuring ionizing radiation by using the excitation effect of incident radiation on a scintillating material, and detecting the resultant light pulses.
spectrophotometer
spectrophotometer
spectrophotometer, optical spectrometer, spectrograph or spectroscope
An optical spectrometer (spectrophotometer, spectrograph or spectroscope) is an instrument used to measure properties of light over a specific portion of the electromagnetic spectrum, typically used in spectroscopic analysis to identify materials.
Butler, L. R. P.; Laqua, K. (1995). "Nomenclature, symbols, units and their usage in spectrochemical analysis-IX. Instrumentation for the spectral dispersion and isolation of optical radiation (IUPAC Recommendations 1995)". Pure Appl. Chem. IUPAC. 67 (10): 1725–1744. doi:10.1351/pac199567101725. A spectrometer is the general term for describing a combination of spectral apparatus with one or more detectors to measure the intensity of one or more spectral bands."
thermometer
thermometer
generic thermometer or reversing thermometer
use thermometer when temperature is a data type, but the exact
instrument used to measure temperature is unknown