Dissolved inorganic carbon, alkalinity, temperature, salinity and other variables collected from discrete sample and profile observations using Alkalinity titrator, CTD and other instruments from RRS JAMES COOK in the South Atlantic Ocean, South Pacific Ocean and Southern Oceans from 2009-02-03 to 2009-03-03 (NCEI Accession 0110379)
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title: Dissolved inorganic carbon, alkalinity, temperature, salinity and other variables collected from discrete sample and profile observations using Alkalinity titrator, CTD and other instruments from RRS JAMES COOK in the South Atlantic Ocean, South Pacific Ocean and Southern Oceans from 2009-02-03 to 2009-03-03 (NCEI Accession 0110379)
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abstract: This dataset includes discrete sample and profile data collected from RRS JAMES COOK in the South Atlantic Ocean, South Pacific Ocean and Southern Oceans (> 60 degrees South) from 2009-02-03 to 2009-03-03. These data include DISSOLVED INORGANIC CARBON (DIC), DISSOLVED OXYGEN, HYDROSTATIC PRESSURE, NITRATE, SALINITY, TOTAL ALKALINITY (TA), WATER TEMPERATURE, phosphate and silicate. The instruments used to collect these data include Alkalinity titrator, CTD, Coulometer for DIC measurement and bottle. These data were collected by Dorothee C. E. Bakker of University of East Anglia; School of Environmental Sciences as part of the CLIVAR_A21_JC031_2009 data set. CDIAC associated the following cruise ID(s) with this data set: CLIVAR_A21_JC031_2009 The International CLIVAR Global Ocean Carbon and Repeat Hydrography Program carries out a systematic and global re-occupation of select WOCE/JGOFS hydrographic sections to quantify changes in storage and transport of heat, fresh water, carbon dioxide (CO2), and related parameters.
purpose: This dataset is available to the public for a wide variety of uses including scientific research and analysis.
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otherConstraints: Cite as: Bakker, Dorothee C. E.; McDonagh, Elaine L.; Stinchcombe, Mark; Messias, Marie-José (2013). Dissolved inorganic carbon, alkalinity, temperature, salinity and other variables collected from discrete sample and profile observations using Alkalinity titrator, CTD and other instruments from RRS JAMES COOK in the South Atlantic Ocean, South Pacific Ocean and Southern Oceans from 2009-02-03 to 2009-03-03 (NCEI Accession 0110379). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://doi.org/10.3334/cdiac/otg.clivar_a21_jc031_2009. Accessed [date].
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useLimitation: Distribution liability: NOAA and NCEI make no warranty, expressed or implied, regarding these data, nor does the fact of distribution constitute such a warranty. NOAA and NCEI cannot assume liability for any damages caused by any errors or omissions in these data. If appropriate, NCEI can only certify that the data it distributes are an authentic copy of the records that were accepted for inclusion in the NCEI archives.
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title: Bakker, D., E. McDonagh, M. Stinchcombe, and M. Messias (2013). Carbon Dioxide, Hydrographic, and Chemical Data Obtained During the R/V James Cook JC031 Cruise in the South Atlantic Ocean on CLIVAR Repeat Hydrography Section A21 (SR1, SR1b) (3 February - 3 March, 2009). Carbon Dioxide Information Analysis Center, Oak Ridge National Laboratory, Oak Ridge, Tennessee, CLIVAR_A21_JC031_2009.
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title: Schuster, U., Watson, A. J., Bakker, D. C. E., Boer, A. de, Jones, E. M., Lee, G. A., Legge, O., Louwerse, A., Riley, J., Scally, S. (2014) Measurements of total alkalinity and inorganic dissolved carbon in the Atlantic Ocean and adjacent Southern Ocean between 2008 and 2010. Earth Syst. Sci. Data 6: 175-183. https://doi.org/10.5194/essd-6-175-2014.
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title: McDonagh E.L.(2009) RRS James Cook Cruise JC031 03 Feb-03 Mar 2009. Hydrographic sections of Drake Passage. Hamersley, D.R.C. and McDonagh E.L. (eds.). Southampton UK National Oceanography Centre Southampton. 170pp. (National Oceanography Centre Southampton Cruise Report (39)).
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title: Charalampopoulou, Anastasia (2011) Coccolithophores in high latitude and Polar regions: Relationships between community composition calcification and environmental factors. University of Southampton School of Ocean and Earth Science Doctoral Thesis. 139pp.
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title: Bakker, D.C.E., M.C. Nielsdottir, P.J. Morris, H.J. Venables, A.J. Watson (2007) The island mass effect and biological carbon uptake for the subantarctic Crozet Archipelago. Deep-Sea Research II, 54: 2174-2190, https://doi.org/10.1016/j.dsr2.2007.06.009.
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individualName: Bakker, Dorothee C.E.
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title: NOAA National Centers for Environmental Information (2022). Ocean Carbon and Acidification Data System (OCADS). NOAA National Centers for Environmental Information. https://www.ncei.noaa.gov/products/ocean-carbon-acidification-data-system
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language:
LanguageCode: eng; USA
characterSet: (MD_CharacterSetCode) utf8
topicCategory: (MD_TopicCategoryCode) environment
topicCategory: (MD_TopicCategoryCode) oceans
extent: (EX_Extent)
geographicElement: (EX_GeographicBoundingBox)
westBoundLongitude: -68.2625
eastBoundLongitude: -54.5888
southBoundLatitude: -64.14
northBoundLatitude: -52.929
temporalElement: (EX_TemporalExtent)
extent:
TimePeriod:
beginPosition: 2009-02-03
endPosition: 2009-03-03
supplementalInformation: These data were acquired by NCEI from the Carbon Dioxide Information Analysis Center (CDIAC) in accordance with an archival submission agreement between CDIAC and NCEI. In this accession, NCEI has archived multiple versions of these data. The latest (and best) version of these data has the largest version number.
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distributionInfo: (MD_Distribution)
distributor: (MD_Distributor)
distributorContact: (CI_ResponsibleParty)
organisationName:
Anchor: https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/institution/details/1730 NOAA National Centers for Environmental Information
contactInfo: (CI_Contact)
phone: (CI_Telephone)
voice: +1-301-713-3277
address: (CI_Address)
electronicMailAddress: NCEI.Info@noaa.gov
role: (CI_RoleCode) pointOfContact
distributionOrderProcess: (MD_StandardOrderProcess)
fees: In most cases, electronic downloads of the data are free. However, fees may apply for custom orders, data certifications, copies of analog materials, and data distribution on physical media.
orderingInstructions: Contact NCEI for other distribution options and instructions.
distributorFormat: (MD_Format)
name: CSV
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transferSize:
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linkage: https://www.ncei.noaa.gov/data/oceans/ncei/ocads/metadata/0110379.html
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applicationProfile: Web browser
name: Project Metadata
description: Navigate directly to the URL for a descriptive web page with download links.
function: (CI_OnLineFunctionCode) information
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linkage: https://doi.org/10.3334/cdiac/otg.clivar_a21_jc031_2009
protocol: HTTPS
applicationProfile: Web browser
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description: Navigate directly to the URL for a descriptive web page with download links.
function: (CI_OnLineFunctionCode) information
onLine: (CI_OnlineResource)
linkage: https://www.ncei.noaa.gov/archive/accession/oas/110379
protocol: HTTPS
applicationProfile: Web browser
name: Descriptive Information
description: Navigate directly to the URL for a descriptive web page with download links.
function: (CI_OnLineFunctionCode) information
onLine: (CI_OnlineResource)
linkage: https://www.ncei.noaa.gov/archive/accession/download/110379
protocol: HTTPS
applicationProfile: Web browser
name: HTTPS
description: Navigate directly to the URL for data access and direct download.
function: (CI_OnLineFunctionCode) download
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linkage: ftp://ftp-oceans.ncei.noaa.gov/nodc/archive/arc0059/0110379/
protocol: FTP
applicationProfile: Any FTP client
name: FTP
description: These data are available through the File Transfer Protocol (FTP). FTP is no longer supported by most internet browsers. You may copy and paste the FTP link to the data into an FTP client (e.g., FileZilla or WinSCP).
function: (CI_OnLineFunctionCode) download
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dataQualityInfo: (DQ_DataQuality)
scope: (DQ_Scope)
level: (MD_ScopeCode) dataset
lineage: (LI_Lineage)
processStep: (LE_ProcessStep)
description: NCEI Accession 0110379 v1.1 was published.
dateTime:
DateTime: 2013-07-12T12:01:11Z
output: (LE_Source)
sourceCitation: (CI_Citation)
title: NCEI Accession 0110379 v1.1
date: (CI_Date)
date: (inapplicable)
dateType: (CI_DateTypeCode) publication
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individualName: (inapplicable)
contactInfo: (CI_Contact)
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linkage: https://www.ncei.noaa.gov/archive/accession/0110379/1.1
protocol: HTTPS
name: NCEI Accession 0110379 v1.1
description: published 2013-07-12T12:01:11Z
function: (CI_OnLineFunctionCode) download
role: (inapplicable)
processStep: (LE_ProcessStep)
description: NCEI Accession 0110379 was revised and v2.2 was published.
rationale: Updates were received for this dataset. These updates were copied into the data/0-data/ directory of this accession. These updates may provide additional files or replace obsolete files. This version contains the most complete and up-to-date representation of this archival information package. All of the files received prior to this update are available in the preceding version of this accession.
dateTime:
DateTime: 2016-02-23T12:30:27Z
output: (LE_Source)
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title: NCEI Accession 0110379 v2.2
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individualName: (inapplicable)
contactInfo: (CI_Contact)
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linkage: https://www.ncei.noaa.gov/archive/accession/0110379/2.2
protocol: HTTPS
name: NCEI Accession 0110379 v2.2
description: published 2016-02-23T12:30:27Z
function: (CI_OnLineFunctionCode) download
role: (inapplicable)
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dataQualityInfo: (DQ_DataQuality)
scope: (DQ_Scope)
level: (MD_ScopeCode) dataset
lineage: (LI_Lineage)
processStep: (LE_ProcessStep)
description: Parameter or Variable: Dissolved Inorganic Carbon; Abbreviation: DIC; Observation type: discrete; In-situ / Manipulation / Response variable: In-situ observation; Measured or calculated: Calculated; Replicate information: Analysis of 2 replicate analyses (per bottle). For the stand-alone instrument values from the 1st and the 2nd analysis did not show a systematic offset and both values were used. For the Vindta instrument only values for the 1st analysis were used, as DIC of the 2nd analysis was systematically slightly lower than that of the 1st analysis due to outgassing. Nonetheless the repeat analyses on the Vindta provided a useful quality control on the performance of the instrument.; CRM batch number: 90 92.
processStep: (LE_ProcessStep)
description: Parameter or Variable: Total alkalinity; Abbreviation: TA; Observation type: discrete; In-situ / Manipulation / Response variable: In-situ observation; Measured or calculated: Measured; Type of titration: Potentiometric titration on 2 Vindtas V4 (ID 4) and V7 (ID 7). The alkalinity measurements were made by potentiometric titration with two VINDTA instruments (#4 and #7, version 3C, Mintrop, 2004). The acid consumption up to the second endpoint is equal to titration alkalinity. The systems use a highly precise Metrohm Titrino for adding acid, an ORION-Ross pH electrode and a Metrohm reference electrode. The pipette (volume approximately 100 ml), and the analysis cell have a water jacket around them. The titrant (0.1 M hydrochloric acid, HCl) was made in the home laboratory. Samples on one Vindta (#4) were run, after analysis on the stand-along DIC extractor and warming to 25°C. Samples on the second Vindta (#7) were run for both DIC and alkalinity at 25°C. Replicate analyses were run for all samples on the Vindta #7 and for most samples on the Vindta #4. At least two CRMs of batch 92 or 90 were run per station. TA was calculated in Matlab code by Steven van Heuven, version 33, based on code by Ernie Lewis in QB (1996);; Cell type (open or closed): Open; Curve fitting method: Modified Levenberg-Marquard least squares program; TA blank correction: Acid factor instrument V4: 0.0970 +/- 0.0004 M; instrument V7: 0.0976 +/- 0.005 M for the hydrochloric acid. Both instruments used subsamples of the same acid stock solution. When preparing the solutions we aimed for an acid factor of 0.1M HCl. The accuracy of the calibration of the TA pipette would have contributed to the difference in the average acid factor between both instruments.; Uncertainty: The accuracy of the TA data (with flag 2) has been estimated as 3 µmol/kg for the cruise. The accuracy has been estimated from the average standard deviation of CRMs per acid batch, which was 1 µmol/kg for the western A21 section and 3 µmol/kg for the eastern SR1b section. The precision of the TA sample averages (with flags 2 and 3) has been estimated as 3 µmol/kg for the cruise from the repeatability of 674 pairs of duplicate samples (Dickson et al., 2007, SOP 23). The repeatability was slightly better for Vindta V4 (2.3 µmol/kg, 372 samples) than for Vindta V7 (2.7 µmol/kg, 302 samples). TA data were calibrated with the acid factors, whenever possible per acid batch. Preliminary data showed substantial offsets between neighboring stations, in particular for the second eastern SR1b section for Vindta V4, with Vindta V4 TA data often lower than those for V7. Such offsets between stations were deemed to be unrealistic and an artifact of the analytical procedure. The acid factor of such outlier stations on Vindta V4 was adjusted in order to remove the offset. This correction concerns stations 11 (+5 µmol/kg), 38 (+4 µmol/kg), 39 (+3 µmol/kg), 43 (+2 µmol/kg), 50 (+5 µmol/kg), 54 (+5 µmol/kg), 58 (+8 µmol/kg), 66 (+3 µmol/kg), 70 (+11 µmol/kg), 71 (+3 µmol/kg), 74 (+3 µmol/kg), 78 (+3 µmol/kg), 82 (+3 µmol/kg), and 83 (+3 µmol/kg). These corrections increased TA and, if incorrect, would have biased the TA data high. The TA data from these stations were given WOCE flag 3 (questionable, probably good). Samples with a difference between repeat analyses exceeding 5 µmol/kg have been given flag 3.; Method reference: unpublished TA and DIC data. Please, contact the PI if you are interested in using these data. Data analysis is described by Bakker, Jones and Riley in: Hamersley, D.R.C & E.L. McDonagh, 2009. Hydrographic sections of Drake Passage, RRS James Cook Cruise JC031. Cruise report no 30. National Oceanography Centre, Southampton, UK. Methods similar to Bakker, D.C.E., M.C. Nielsdóttir, P.J. Morris, H.J. Venables, A.J. Watson (2007) The island mass effect and biological carbon uptake for the subantarctic Crozet Archipelago. Deep-Sea Research II, 54: 2174-2190, https://doi.org/10.1016/j.dsr2.2007.06.009..
processStep: (LE_ProcessStep)
description: Parameter or Variable: CTDTMP; Abbreviation: CTDTMP; Unit: DEG_C; Controlled vocabulary name: WATER TEMPERATURE; In-situ / Manipulation / Response variable: in-situ.
processStep: (LE_ProcessStep)
description: Parameter or Variable: CTDSAL; Abbreviation: CTDSAL; Controlled vocabulary name: SALINITY; In-situ / Manipulation / Response variable: in-situ.
processStep: (LE_ProcessStep)
description: Parameter or Variable: SALNTY; Abbreviation: SALNTY; Controlled vocabulary name: SALINITY; In-situ / Manipulation / Response variable: in-situ.
processStep: (LE_ProcessStep)
description: Parameter or Variable: CTDOXY; Abbreviation: CTDOXY; Unit: UMOL/KG; Controlled vocabulary name: DISSOLVED OXYGEN; In-situ / Manipulation / Response variable: in-situ.
processStep: (LE_ProcessStep)
description: Parameter or Variable: OXYGEN; Abbreviation: OXYGEN; Unit: UMOL/KG; Controlled vocabulary name: DISSOLVED OXYGEN; In-situ / Manipulation / Response variable: in-situ.
processStep: (LE_ProcessStep)
description: Parameter or Variable: SILCAT; Abbreviation: SILCAT; Unit: UMOL/KG; Controlled vocabulary name: silicate; In-situ / Manipulation / Response variable: in-situ.
processStep: (LE_ProcessStep)
description: Parameter or Variable: NITRAT; Abbreviation: NITRAT; Unit: UMOL/KG; Controlled vocabulary name: NITRATE; In-situ / Manipulation / Response variable: in-situ.
processStep: (LE_ProcessStep)
description: Parameter or Variable: PHSPHT; Abbreviation: PHSPHT; Unit: UMOL/KG; Controlled vocabulary name: phosphate; In-situ / Manipulation / Response variable: in-situ.
processStep: (LE_ProcessStep)
description: Parameter or Variable: TCARBN; Abbreviation: TCARBN; Unit: UMOL/KG; Controlled vocabulary name: DISSOLVED INORGANIC CARBON (DIC); In-situ / Manipulation / Response variable: in-situ.
processStep: (LE_ProcessStep)
description: Parameter or Variable: ALKALI; Abbreviation: ALKALI; Unit: UMOL/KG; Controlled vocabulary name: total alkalinity; In-situ / Manipulation / Response variable: in-situ .
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dataQualityInfo: (DQ_DataQuality)
scope: (DQ_Scope)
level: (MD_ScopeCode) repository
levelDescription: (MD_ScopeDescription)
other: NOAA National Centers for Environmental Information
lineage: (LI_Lineage)
processStep: (LE_ProcessStep)
description: NOAA created the National Centers for Environmental Information (NCEI) by merging NOAA's National Climatic Data Center (NCDC), National Geophysical Data Center (NGDC), and National Oceanographic Data Center (NODC), including the National Coastal Data Development Center (NCDDC), per the Consolidated and Further Continuing Appropriations Act, 2015, Public Law 113-235. NCEI launched publicly on April 22, 2015.
dateTime:
DateTime: 2015-04-22T00:00:00
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metadataMaintenance: (MD_MaintenanceInformation)
maintenanceAndUpdateFrequency: (MD_MaintenanceFrequencyCode) asNeeded
maintenanceNote: Metadata are developed, maintained and distributed by NCEI. Updates are performed as needed to maintain currentness.
maintenanceNote: NCEI Accession 0110379 was revised and a new version of the archival package was published. Updates to existing archival packages may provide additional files or replace obsolete files. The latest version contains the most complete and up-to-date representation of this archival information package. All of the files received prior to this update are available in the preceding version of this accession. Please see journal.txt in the /about directory for additional details on changes made.
contact: (CI_ResponsibleParty)
organisationName: NOAA National Centers for Environmental Information
role: (CI_RoleCode) custodian
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acquisitionInformation: (MI_AcquisitionInformation)
instrument: (MI_Instrument)
identifier: (MD_Identifier)
code: bottle
type: bottle
description: any type of water bottle sampling device Generic name for water collection device; usually used to determine temperature, salinity and provide water aliquots for measurement of a wide range of parameters; often referred to by a specific type of water sampling bottle, such as a Nansen or Niskin bottle.
instrument: (MI_Instrument)
identifier: (MD_Identifier)
code: coulometer for DIC measurement
type: coulometer for DIC measurement
description: measures dissolved inorganic carbon (DIC) A known amount of seawater is dispensed into a stripping chamber where it is acidified and purged with an inert gas. The amount of CO2 in the resulting gas stream is determined by absorbing the CO2 in an absorbent. The pH of the solution is monitored by measuring the transmittance .
instrument: (MI_Instrument)
identifier: (MD_Identifier)
code: CTD
type: CTD
description: Conductivity-Temperature-Depth probe
instrument: (MI_Instrument)
identifier: (MD_Identifier)
code: titrator
type: titrator
description: titrator
platform: (MI_Platform)
identifier: (MD_Identifier)
code: RRS James Cook
description: Natural Environment Research Council research vessel - to be delivered in August 2006 Source: http://www.itu.int/online/mms/mars/ship_search.sh Ship Name Call Sign MMSI EPIRB ID code Admin. Geo. area RRS JAMES COOK MLRM6 235010700 G G Source: http://www.world-register.org/ Ship name Ship type DWT Built Flag James Cook Oceanographic/Research 2463 2006 United Kingdom http://www.jcommops.org/soopip/ Call sign IMO Ship name Alloc. date Dealloc. date Country VOS type MLRM6 9338242 JAMES COOK 01/01/3000 25/10/2006 GBR RV
instrument: (missing)