Dissolved inorganic carbon, pH and other variables measured from laboratory experiment studies from an experimental carbonate exposure system from 2013-05-15 to 2013-07-12 (NCEI Accession 0123316)
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title: Dissolved inorganic carbon, pH and other variables measured from laboratory experiment studies from an experimental carbonate exposure system from 2013-05-15 to 2013-07-12 (NCEI Accession 0123316)
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abstract: This dataset contains the carbon chemistry measurements of a laboratory experiment study to understand the effects of ocean acidification on winter flounders. To address the goals of the NOAA Ocean Acidification Program (OA), the James J. Howard Laboratory constructed an OA experimental system to conduct OA experiments on commercially important species native to Atlantic waters of the NE U.S. The species of interest exhibit a broad range of ecological and life-history types from entirely marine to entirely estuarine. In order to conduct OA experiments on several different species, the required experimental system was able to mimic both estuarine and oceanic conditions. This system was designed to produce 5 pCO2 concentrations above an ambient pCO2 treatment and 5 temperature regimes. The system is also capable of manipulating dissolved oxygen, salinity, and other biogeochemicals common to a benthic habitat. The analytical laboratory conducts analysis according to the guidelines developed by the ocean acidification subcommittee of the Ocean Carbon and Biogeochemistry Program. When followed correctly, these guidelines should produce data with a high degree of accuracy and precision.
purpose: To construct a multi-variable ocean acidification experimental system fully costomizable to the target species for experimentation.
credit: Funding Information: NOAA Ocean Acidification Program (Calcium Carbonate Measurements and Experiments, OAPFY12.02.NEFSC.006)
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title: Wieczorek, Daniel; Poach, Matthew (2014). Dissolved inorganic carbon, pH and other variables measured from laboratory experiment studies from an experimental carbonate exposure system from 2012-02-29 to 2012-05-11 (NCEI Accession 0123315). NOAA National Centers for Environmental Information. Dataset. https://doi.org/10.7289/v5z03646.
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Anchor: https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/institution/details/614 US DOC; NOAA; NMFS; Northeast Fisheries Science Center - Sandy Hook, NJ; J.J. Howard Laboratory
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electronicMailAddress: daniel.wieczorek@noaa.gov
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individualName: Poach, Matthew
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Anchor: https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/institution/details/199 NOAA Fisheries Northeast Fisheries Science Center (NMFS/NEFSC)
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Anchor: https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/institution/details/1730 US DOC; NOAA; NESDIS; National Centers for Environmental Information (NCEI)
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title: NOAA National Centers for Environmental Information (2022). Ocean Carbon and Acidification Data System (OCADS). NOAA National Centers for Environmental Information. https://www.ncei.noaa.gov/products/ocean-carbon-acidification-data-system
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date: 2022-04
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Anchor: https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/institution/details/1730 NOAA National Centers for Environmental Information
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LanguageCode: eng; USA
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topicCategory: (MD_TopicCategoryCode) environment
topicCategory: (MD_TopicCategoryCode) oceans
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westBoundLongitude: -73.9952
eastBoundLongitude: -73.9952
southBoundLatitude: 40.4529
northBoundLatitude: 40.4529
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extent:
TimePeriod:
beginPosition: 2013-05-15
endPosition: 2013-07-12
supplementalInformation: (missing)
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distributionInfo: (MD_Distribution)
distributor: (MD_Distributor)
distributorContact: (CI_ResponsibleParty)
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Anchor: https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/institution/details/1730 NOAA National Centers for Environmental Information
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electronicMailAddress: NCEI.Info@noaa.gov
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fees: In most cases, electronic downloads of the data are free. However, fees may apply for custom orders, data certifications, copies of analog materials, and data distribution on physical media.
orderingInstructions: Contact NCEI for other distribution options and instructions.
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linkage: https://www.ncei.noaa.gov/archive/accession/oas/123316
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linkage: https://www.ncei.noaa.gov/archive/accession/download/123316
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linkage: ftp://ftp-oceans.ncei.noaa.gov/nodc/archive/arc0071/0123316/
protocol: FTP
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description: These data are available through the File Transfer Protocol (FTP). FTP is no longer supported by most internet browsers. You may copy and paste the FTP link to the data into an FTP client (e.g., FileZilla or WinSCP).
function: (CI_OnLineFunctionCode) download
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dataQualityInfo: (DQ_DataQuality)
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description: NCEI Accession 0123316 v1.1 was published.
dateTime:
DateTime: 2014-12-18T16:43:10Z
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title: NCEI Accession 0123316 v1.1
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linkage: https://www.ncei.noaa.gov/archive/accession/0123316/1.1
protocol: HTTPS
name: NCEI Accession 0123316 v1.1
description: published 2014-12-18T16:43:10Z
function: (CI_OnLineFunctionCode) download
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dataQualityInfo: (DQ_DataQuality)
scope: (DQ_Scope)
level: (MD_ScopeCode) dataset
lineage: (LI_Lineage)
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description: Parameter or Variable: Dissolved Inorganic Carbon; Abbreviation: DIC; Unit: umol/kg; Observation type: Dissolved inorganic carbon; In-situ / Manipulation / Response variable: Manipulation condition; Measured or calculated: Measured; Sampling instrument: manual; Analyzing instrument: NDIR based DIC analyzer (Apollo SciTech Inc); Detailed sampling and analyzing information: Column samples were collected by hand using a tube attached to the bypass at the base of each CO2 addition column. Experimental container samples were extracted and transfered to sample bottles using a 60 mL syringe. All samples were collected in a 300mL glass BOD bottle by filling from the bottom of the bottle. A 0.75 mL volume of each sample was analyzed on an Apollo SciTech DIC analyzer.; Replicate information: no field replicates collected; Standardization description: Different volumes of a CRM were analyzed and the area outputwas used to produce a standard curve. A CRM was also analyzed at the beginning and end of a daily sample analysis. The standard curve was used to determine the measured CRM and sample values from the coulometer output. The difference in the measured CRM value from its real value was used to determine measurement uncertainty.; Standardization frequency: Daily; CRM manufacturer: Dickson Lab at UCSD; Preservation method: Saturated solution of mercuric chloride; Preservative volume: 0.06mL; Preservative correction: none; Researcher name: Matthew Poach; Researcher institution: NOAA-James J. Howard Lab.
processStep: (LE_ProcessStep)
description: Parameter or Variable: Total alkalinity; Abbreviation: ALK; Unit: umol/kg; Observation type: Laboratory experiment; In-situ / Manipulation / Response variable: Manipulation condition; Measured or calculated: calculated; Researcher name: Daniel Wieczorek; Researcher institution: Northeast Fisheries Science Center, National Marine Fisheries Service, National Oceanic and Atmospheric Administration.
processStep: (LE_ProcessStep)
description: Parameter or Variable: pH; Abbreviation: Spectrophotometer pH; pH scale: total; Observation type: pH; In-situ / Manipulation / Response variable: Manipulation condition; Measured or calculated: measured; Sampling instrument: manual; Analyzing instrument: dual beam spectrophotometer (Varian/Agilent -Cary 300); Temperature of pH measurement: provided in data file (~25 C); Detailed sampling and analyzing information: Samples were collected according to location. Samples from the columns were collected in a 250mL plastic bottle and transfer by pouring into a 100mm spec cell. Samples from experimental containers or from DIC sample bottles were collected and transferred to a spec cell using a 60mL syringe. The spectrophotometer was then used to determine absorbances at wavelengths of 434, 578, and 730 for a sample without and then with 2mM m-cresol purple dye added. The absorbance values were used to determine pH according to the citation given below; Replicate information: no field replicates; Standardization description: A tris buffer obtained from the Dickson lab at UCSD was analyzed to check the functioning of the instrument and quality of the dye solution; Standardization frequency: start of experiment; Temperature of standardization: 25 C; Temperature correction method: NA; At what temperature was pH reported: provided in data file; Method reference: SOP 6b in Dickson, A.G., Sabine, C.L. and Christian, J.R. (Eds.) 2007. Guide to best practices for ocean CO2 measurements. PICES Special Publication 3, 191 pp.; Researcher name: Matthew Poach; Researcher institution: NOAA-James J. Howard Lab.
processStep: (LE_ProcessStep)
description: Parameter or Variable: pCO2 (fCO2) autonomous; Abbreviation: pCO2; Unit: uatm; Observation type: Laboratory experiment; In-situ / Manipulation / Response variable: Manipulation condition; Measured or calculated: Calculated.
processStep: (LE_ProcessStep)
description: Parameter or Variable: Durfet pH; Abbreviation: Durfet pH; Observation type: Laboratory experiment; In-situ / Manipulation / Response variable: Manipulation condition; Measured or calculated: Measured; Sampling instrument: Durfet iii; Analyzing instrument: Honeywell UDA Analyzer; Duration: 58.1 days; Detailed sampling and analyzing information: Durfet installed on each treatment column; Species ID: Pseudopleuronectes americanus; Researcher name: Daniel Wieczorek; Researcher institution: National Marine Fisheries Service.
processStep: (LE_ProcessStep)
description: Parameter or Variable: Electrode pH; Abbreviation: Electrode pH; Observation type: Laboratory experiment; In-situ / Manipulation / Response variable: Manipulation condition; Measured or calculated: Measured; Sampling instrument: Orion pH electrode; Analyzing instrument: Hanna; Duration: 58.1 days; Detailed sampling and analyzing information: Water samples taken from treatment columns.; Species ID: Pseudopleuronectes americanus; Researcher name: Daniel Wieczorek; Researcher institution: National Marine Fisheries Service.
processStep: (LE_ProcessStep)
description: Parameter or Variable: Salinity; Abbreviation: Salinity; Observation type: Laboratory experiment; In-situ / Manipulation / Response variable: Manipulation condition; Measured or calculated: Measured; Analyzing instrument: traceable conductivity meter from Control Company; Duration: 58.1 days; Detailed sampling and analyzing information: Measurements taken prior to analysis on spec.; Species ID: Pseudopleuronectes americanus; Researcher name: Daniel Wieczorek; Researcher institution: National Marine Fisheries Service.
processStep: (LE_ProcessStep)
description: Parameter or Variable: Spectrophotometer Temp; Abbreviation: Spectrophotometer Temp; Observation type: Laboratory experiment; In-situ / Manipulation / Response variable: Manipulation condition; Measured or calculated: Measured; Analyzing instrument: traceable digital thermometer from Fisher Scientific; Duration: 58.1 days; Detailed sampling and analyzing information: Measurements taken prior to analysis on spec.; Species ID: Pseudopleuronectes americanus; Researcher name: Daniel Wieczorek; Researcher institution: National Marine Fisheries Service.
processStep: (LE_ProcessStep)
description: Parameter or Variable: Sample Temp; Abbreviation: Sample Temp; Observation type: Laboratory experiment; In-situ / Manipulation / Response variable: Manipulation condition; Measured or calculated: Measured; Sampling instrument: Durfet iii; Analyzing instrument: Honeywell UDA Analyzer; Duration: 58.1 days; Detailed sampling and analyzing information: Durfet installed on each treatment column; Species ID: Pseudopleuronectes americanus; Researcher name: Daniel Wieczorek; Researcher institution: National Marine Fisheries Service .
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dataQualityInfo: (DQ_DataQuality)
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other: NOAA National Centers for Environmental Information
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description: NOAA created the National Centers for Environmental Information (NCEI) by merging NOAA's National Climatic Data Center (NCDC), National Geophysical Data Center (NGDC), and National Oceanographic Data Center (NODC), including the National Coastal Data Development Center (NCDDC), per the Consolidated and Further Continuing Appropriations Act, 2015, Public Law 113-235. NCEI launched publicly on April 22, 2015.
dateTime:
DateTime: 2015-04-22T00:00:00
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metadataMaintenance: (MD_MaintenanceInformation)
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maintenanceNote: Metadata are developed, maintained and distributed by NCEI. Updates are performed as needed to maintain currentness.
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organisationName: NOAA National Centers for Environmental Information
role: (CI_RoleCode) custodian
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acquisitionInformation: (MI_AcquisitionInformation)
instrument: (MI_Instrument)
identifier: (MD_Identifier)
code: Non-dispersive infrared (NDIR) dissolved inorganic carbon (DIC) analyzer
type: Non-dispersive infrared (NDIR) dissolved inorganic carbon (DIC) analyzer
description: A known amount of seawater is dispensed into a stripping chamber where it is acidified and purged with an inert gas. The amount of CO2 in the resulting gas stream is determined with a non-dispersive infrared (NDIR) carbon dioxide analyzer.
instrument: (MI_Instrument)
identifier: (MD_Identifier)
code: spectrophotometer
type: spectrophotometer
description: spectrophotometer, optical spectrometer, spectrograph or spectroscope An optical spectrometer (spectrophotometer, spectrograph or spectroscope) is an instrument used to measure properties of light over a specific portion of the electromagnetic spectrum, typically used in spectroscopic analysis to identify materials. Butler, L. R. P.; Laqua, K. (1995). "Nomenclature, symbols, units and their usage in spectrochemical analysis-IX. Instrumentation for the spectral dispersion and isolation of optical radiation (IUPAC Recommendations 1995)". Pure Appl. Chem. IUPAC. 67 (10): 1725–1744. doi:10.1351/pac199567101725. A spectrometer is the general term for describing a combination of spectral apparatus with one or more detectors to measure the intensity of one or more spectral bands."
