gov.noaa.nodc:0159158
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2024-02-21T13:40:56Z
ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
National Coral Reef Monitoring Program: Benthic Cover Derived from Analysis of Benthic Images Collected during Stratified Random Surveys (StRS) across Wake Island from 2014-03-16 to 2014-03-20 (NCEI Accession 0159158)
2017-02-06
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0159158
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Troy Kanemura
US DOC; NOAA; NMFS; Pacific Islands Fisheries Science Center; Ecosystem Sciences Division; Coral Reef Ecosystem Program (CREP)
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http://www.pifsc.noaa.gov/cred
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Troy Kanemura
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troy.kanemura@noaa.gov
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collaborator
US DOC; NOAA; NOS; Coral Reef Conservation Program (CRCP)
coralreef@noaa.gov
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Coral Reef Conservation Program website
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Bernardo Vargas-Ángel
US DOC; NOAA; NMFS; Pacific Islands Fisheries Science Center; Ecosystem Sciences Division; Coral Reef Ecosystem Program (CREP)
bernardo.vargasangel@noaa.gov
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Coral Reef Ecosystem Program
http://www.pifsc.noaa.gov/cred
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author
Pacific Islands Fisheries Science Center
author
US DOC; NOAA; NMFS; Pacific Islands Fisheries Science Center; Ecosystem Sciences Division; Coral Reef Ecosystem Program (CREP)
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The data described here result from benthic photo-quadrat surveys conducted along transects at stratified random sites across the Pacific Remote Island Areas in 2014 as a part of Rapid Ecological Assessment (REA) surveys for corals and fish. Benthic habitat imagery were quantitatively analyzed using the Coral Point Count with Excel extensions (CPCe; Kohler and Gill, 2006) software. In general, images are analyzed to produce three functional group levels of benthic cover: Tier 1 (e.g., hard coral, soft coral, macroalgae, turf algae, etc.), Tier 2 (e.g., Hard Coral = massive, branching, foliose, encrusting, etc.; Macroalgae = upright macroalgae, encrusting macroalgae, bluegreen macroalgae, and Halimeda, etc.), and Tier 3 (e.g., Hard Coral = Astreopora sp, Favia sp, Pocillopora, etc.; Macroalgae = Caulerpa sp, Dictyosphaeria sp, Padina sp, etc.).
A stratified random sampling (StRS) design was employed to survey the coral reef ecosystems throughout the U.S. Pacific regions. The survey domain encompassed the majority of the mapped area of reef and hard bottom habitats in the 0-30 m depth range. The stratification scheme included island, reef zone, and depth in all regions, as well as habitat structure type in the Main Hawaiian Islands. Sampling effort was allocated based on strata area and sites were randomly located within strata. Sites were surveyed using photo-quadrats along transects to collect benthic imagery to ultimately produce estimates of relative abundance (percent cover), frequency of occurrence, benthic community taxonomic composition and relative generic richness.
The StRS design effectively reduces estimate variance through stratification using environmental covariates and by sampling more sites rather than sampling more transects at a site. Therefore, site-level estimates and site to site comparisons should be used with caution.
The NOAA National Coral Reef Monitoring Program (NCRMP) details a long term approach to provide an ecosystem perspective via monitoring climate, fish, benthic, and socioeconomic variables in a consistent and integrated manner. The NCRMP is intended to coordinate various NOAA Coral Reef Conservation Program (CRCP) biological, physical, and human dimensions activities into a cohesive NOAA-wide effort. Through the implementation of the NCRMP, NOAA will be able to clearly and concisely communicate results of national-scale monitoring to national, state, and territorial policy makers, resource managers, and the public on a periodic basis.
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0159158
NCEI ACCESSION NUMBER
2016-12-30
publication
REEF AND/OR BOTTOM REGIME - PERCENT COVER
theme
NODC DATA TYPES THESAURUS
laboratory analyses
theme
NODC OBSERVATION TYPES THESAURUS
NOAA Ship Hi'ialakai
platform
NODC PLATFORM NAMES THESAURUS
US DOC; NOAA; NMFS; Pacific Islands Fisheries Science Center; Ecosystem Sciences Division; Coral Reef Ecosystem Program
dataCentre
NODC COLLECTING INSTITUTION NAMES THESAURUS
US DOC; NOAA; NMFS; Pacific Islands Fisheries Science Center; Ecosystem Sciences Division; Coral Reef Ecosystem Program
dataCentre
NODC SUBMITTING INSTITUTION NAMES THESAURUS
Coral Reef Conservation Program (CRCP)
CORAL REEF STUDIES
National Coral Reef Monitoring Program (NCRMP)
Pacific Reef and Assessment Monitoring Program (Pacific RAMP)
project
NODC PROJECT NAMES THESAURUS
North Pacific Ocean
place
NODC SEA AREA NAMES THESAURUS
oceanography
theme
WMO_CategoryCode
2012-09-15
publication
CRED
CREP
Coral Reef Ecosystem Division
Coral Reef Ecosystem Program
PIFSC
Pacific Islands Fisheries Science Center
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Contributing Data Centers
DOC/NOAA/NMFS > National Marine Fisheries Service, NOAA, U.S. Department of Commerce
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Global Change Master Directory (GCMD) Data Center Keywords
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custodian
743
National Coral Reef Monitoring Program (NCRMP)
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CRCP Project
Numeric Data Sets > Benthic
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CoRIS Discovery Thesaurus
EARTH SCIENCE > Biosphere > Aquatic Habitat > Benthic Habitat
EARTH SCIENCE > Biosphere > Aquatic Habitat > Reef Habitat
EARTH SCIENCE > Biosphere > Microbiota > Blue-green Algae
EARTH SCIENCE > Biosphere > Vegetation > Algae > Algal Cover
EARTH SCIENCE > Biosphere > Vegetation > Algae > Crustose Coralline Algae
EARTH SCIENCE > Biosphere > Vegetation > Algae > Encrusting Macroalgae
EARTH SCIENCE > Biosphere > Vegetation > Algae > Turf Algae
EARTH SCIENCE > Biosphere > Zoology > Corals
EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment
EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > Baseline studies
EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > Benthos Analysis
EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > Benthos Analysis > Quadrat Monitoring > Photograph Analysis
EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > Benthos Analysis > Transect Monitoring > Belt Transect
EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > Benthos Analysis > Transect monitoring
EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > In Situ Biological
EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > Photographic Analysis
EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > Rapid Assessment Studies
EARTH SCIENCE > Biosphere > Zoology > Mollusks > Tridacna
EARTH SCIENCE > Biosphere > Zoology > Sponges
EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs > Coral Reef Ecology
EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs > Coral Reef Ecology > Benthic biology
EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs > Coral Reef Ecology > Coral Cover
EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs > Coral Reef Ecology > Hard Coral Cover
EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs > Coral Reef Ecology > Hard Coral Cover Live percentage
EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs > Coral Reef Ecology > OctoCoral Cover
EARTH SCIENCE > Oceans > Marine Biology > Coral
EARTH SCIENCE > Oceans > Marine Biology > Coral Communities
EARTH SCIENCE > Oceans > Marine Biology > Marine Invertebrates
EARTH SCIENCE > Oceans > Marine Biology > Marine Invertebrates > Macroinvertebrates
EARTH SCIENCE > Oceans > Marine Biology > Marine Plants > Seagrass
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Ships
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Hi'ialakai (ICES code: 33HL)
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ICES/SeaDataNet Ship Codes
COUNTRY/TERRITORY > United States of America > USA Minor Outlying Islands > Wake Atoll (19N167E0001)
OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Wake Atoll > Wake Atoll (19N167E0001)
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PRIA
Pacific Remote Island Areas
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Provider Place Names
accessLevel: Public
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Cite as: Coral Reef Ecosystem Program; Pacific Islands Fisheries Science Center (2017). National Coral Reef Monitoring Program: Benthic Cover Derived from Analysis of Benthic Images Collected during Stratified Random Surveys (StRS) across Wake Island from 2014-03-16 to 2014-03-20 (NCEI Accession 0159158). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0159158. Accessed [date].
Distribution liability: NOAA and NCEI make no warranty, expressed or implied, regarding these data, nor does the fact of distribution constitute such a warranty. NOAA and NCEI cannot assume liability for any damages caused by any errors or omissions in these data. If appropriate, NCEI can only certify that the data it distributes are an authentic copy of the records that were accepted for inclusion in the NCEI archives.
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Use liability: NOAA and NCEI cannot provide any warranty as to the accuracy, reliability, or completeness of furnished data. Users assume responsibility to determine the usability of these data. The user is responsible for the results of any application of this data for other than its intended purpose.
National Coral Reef Monitoring Program: Benthic cover derived from analysis of images collected during stratified random surveys (StRS) across the Pacific Remote Island Areas
2018-03-07
publication
NOAA National Centers for Environmental Information
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Coral Reef Conservation Program (2016). Documentation for NOAA's Coral Reef Conservation Program (CRCP) National Coral Reef Monitoring Program (NCRMP) data archived at NCEI (NCEI Accession 0157633). NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0157633.
2016-12-22
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NOAA National Centers for Environmental Information
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Pacific Islands Fisheries Science Center, 2021: National Coral Reef Monitoring Program: Benthic Cover Derived from Analysis of Benthic Images Collected during Stratified Random Surveys (StRS) across the Pacific Remote Island Areas since 2014, https://www.fisheries.noaa.gov/inport/item/36157.
2021
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US DOC; NOAA; NMFS; Pacific Islands Fisheries Science Center (NMFS/PIFSC)
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tableDigital
crossReference
Coral Point Count with Excel extensions (CPCe): A Visual Basic program for the determination of coral and substrate coverage using random point count methodology
2006
publication
International DOI Foundation (IDF)
https://doi.org/10.1016/j.cageo.2005.11.009
https://doi.org/10.1016/j.cageo.2005.11.009
HTTPS
Coral Point Count with Excel extensions (CPCe): A Visual Basic program for the determination of coral and substrate coverage using random point count methodology
Kohler, K.E. and S.M. Gill, 2006. Coral Point Count with Excel extensions (CPCe): A Visual Basic program for the determination of coral and substrate coverage using random point count methodology. Computers and Geosciences, Vol. 32, No. 9, pp. 1259-1269, https://doi.org/10.1016/j.cageo.2005.11.009.
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Kohler, K.E.
author
Gill, S.M.
author
Computers and Geosciences
Vol. 32, No. 9
pp. 1259-1269
crossReference
Towards automated annotation of benthic survey images: variability of human experts and operational modes of automation
2015
publication
International DOI Foundation (IDF)
https://doi.org/10.1371/journal.pone.0130312
https://doi.org/10.1371/journal.pone.0130312
HTTPS
Towards automated annotation of benthic survey images: variability of human experts and operational modes of automation
O. Beijbom, P. J. Edmunds, C. Roelfsema, J. Smith, D. I. Kline, B. Neal, M. J. Dunlap, V. Moriarty, T-Y. Fan, C-J. Tan, S. Chan, T. Treibitz, A. Gamst, B. G. Mitchell, D. Kriegman. "Towards automated annotation of benthic survey images: variability of human experts and operational modes of automation". PLOS One, July 2015.
information
O. Beijbom
author
P. J. Edmunds
author
C. Roelfsema
author
J. Smith
author
D. I. Kline
author
B. Neal
author
M. J. Dunlap
author
V. Moriarty
author
T-Y. Fan
author
C-J. Tan
author
S. Chan
author
T. Treibitz
author
A. Gamst
author
B. G. Mitchell
author
D. Kriegman
author
PLOS One
published online July 2015
crossReference
Cruise report, NOAA Ship Hi'ialakai, Cruise HA-14-01 Leg I, 5- 24 March, 2014, Wake Atoll
2015
publication
https://library.oarcloud.noaa.gov/noaa_documents.lib/NMFS/PIFSC/PIFSC_Cruise_Report/CR_15_003.pdf
HTTPS
Cruise report, NOAA Ship Hi'ialakai, Cruise HA-14-01 Leg I, 5- 24 March, 2014, Wake Atoll
Cruise report, NOAA Ship Hi'ialakai
information
crossReference
eng; USA
utf8
environment
biota
166.594
166.657
19.2674
19.3257
2014-03-16
2014-03-20
Submission Package ID: DE3CUJ
NOAA National Centers for Environmental Information
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https://www.ncei.noaa.gov/erddap/tabledap/CRCP_Benthic_Cover_PRIAs.html
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CRCP Benthic Cover PRIAs
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NCEI Accession 0159158 v1.1 was published.
2017-02-06T22:25:07Z
NCEI Accession 0159158 v1.1
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NCEI Accession 0159158 v1.1
published 2017-02-06T22:25:07Z
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Data Type: REEF AND/OR BOTTOM REGIME - PERCENT COVER (measured); Units: percent; Observation Type: laboratory analysis; Sampling Instrument: laboratory analysis.
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NOAA National Centers for Environmental Information
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NOAA Ship Hi'ialakai
Title: NOAA Ship
Flag: United States of America
Vessel Type: Research Vessel
DOB: Nov 1984
IMO: 8835619
Hull No: R 334
Former Name: Vindicator (2004)
Commissioned by NOAA in 2002
Submitted to ICES on 2012-12-13.