Assessing cryptic reef diversity of colonizing marine invertebrates using Autonomous Reef Monitoring Structures (ARMS) deployed at coral reef sites in Batangas, Philippines from 2012-03-12 to 2015-05-31 (NCEI Accession 0162829)
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title: Assessing cryptic reef diversity of colonizing marine invertebrates using Autonomous Reef Monitoring Structures (ARMS) deployed at coral reef sites in Batangas, Philippines from 2012-03-12 to 2015-05-31 (NCEI Accession 0162829)
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abstract: Autonomous Reef Monitoring Structures (ARMS) are used by the NOAA Coral Reef Ecosystem Program (CREP) to assess and monitor cryptic reef diversity across the Pacific. Developed in collaboration with the Census of Marine Life (CoML) Census of Coral Reef Ecosystems (CReefs), ARMS are designed to mimic the structural complexity of a reef and attract/collect colonizing marine invertebrates. The key innovation of the ARMS method is that biodiversity is sampled over precisely the same surface area in the exact same manner. Thus, the use of ARMS is a systematic, consistent, and comparable method for monitoring the marine cryptobiota community over time. The data described here were collected by CREP from ARMS moored at fixed climate survey sites located on hard bottom shallow water (< 15 m) habitats in the Philippines. Climate sites were established by CREP to assess multiple features of the coral reef environment (in addition to the data described herein) from March 2012 to June 2015, and three ARMS units were deployed by SCUBA divers at each survey site. The data can be accessed online via the NOAA National Centers for Environmental Information (NCEI) Ocean Archive. Each ARMS unit, constructed in-house by CREP, consisted of 23 cm x 23 cm gray, type 1 PVC plates stacked in alternating series of 4 open and 4 obstructed layers and attached to a base plate of 35 cm x 45 cm, which was affixed to the reef. Upon recovery, each ARMS unit was encapsulated, brought to the surface, and disassembled and processed. Disassembled plates were photographed to document recruited sessile organisms and scraped clean and preserved in 95% ethanol for DNA processing. Recruited motile organisms were sieved into 3 size fractions: 2 mm, 500 µm, and 100 µm. The 500 µm and 100 µm fractions were bulked and also preserved in 95% ethanol for DNA processing. The 2 mm fraction was sorted into morphospecies. The DNA sequencing data are not included in this archival package.
purpose: The Coral Reef Ecosystem Program (CREP) at NOAA Fisheries is conducting in-situ climate monitoring across the U.S. Pacific Islands Region. Climate monitoring provides a comprehensive view of climate change impacts on coral reef ecosystems and helps identify areas of resilience and vulnerability. The key indicators used to identify and monitor climate-driven trends include 1) thermal stress caused by changes in sea temperature, 2) ocean acidification resulting from changes in carbonate chemistry, and 3) ecological impacts by collecting data on coral growth rates and community structure to understand the impacts of thermal stress and ocean acidification on the ecosystem. This particular dataset for the Philippines is part of a 3-year project ("Climate, Biodiversity and Fisheries in the Coral Triangle: Embracing the E in Ecosystem Approaches to Fisheries Management") implemented by CREP. This project was funded by NOAA's Coral Reef Conservation Program (CRCP) and the U.S. Agency for International Development (USAID) Regional Development Mission Asia (RDMA) as part of the U.S. Coral Triangle Initiative, with additional support from the Coral Triangle Support Partnership and USAID Philippines. The goal of the project was to build on CREP's expertise to provide tools and information about climate change, ocean acidification, and their impacts on biodiversity and fisheries that could inform and be incorporated into an Ecosystem Approach to Fisheries Management (EAFM) for the Philippines. CREP worked with local governments, communities, and NGOs to build science capacity by establishing robust observing capabilities and providing hands-on training to initiate collection of climate science information for the Verde Island Passage in the Philippines that can be used toward adaptive EAFM.
credit: Related Funding Agency: NOAA Coral Reef Conservation Program
credit: Related Funding Agency: US DOS; United States Agency for International Development (USAID)
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title: Pacific Islands Fisheries Science Center, 2017: Assessing cryptic reef diversity of colonizing marine invertebrates using Autonomous Reef Monitoring Structures (ARMS) deployed at coral reef sites in Batangas, Philippines from 2012 to 2015, https://www.fisheries.noaa.gov/inport/item/45818.
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Anchor: https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/institution/details/1347 US DOC; NOAA; NMFS; Pacific Islands Fisheries Science Center (NMFS/PIFSC)
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beginPosition: 2012-03-12
endPosition: 2015-05-31
supplementalInformation: Submission Package ID: PH0AXF The DNA sequencing data described in the abstract were not submitted as part of this archival package. In this accession, NCEI has archived multiple versions of these data. The latest (and best) version of these data has the largest version number.
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orderingInstructions: Contact NCEI for other distribution options and instructions.
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function: (CI_OnLineFunctionCode) download
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dataQualityInfo: (DQ_DataQuality)
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description: NCEI Accession 0162829 v1.1 was published.
dateTime:
DateTime: 2017-07-14T23:30:15Z
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description: NCEI Accession 0162829 was revised and v2.2 was published.
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dateTime:
DateTime: 2021-06-14T12:00:21Z
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name: NCEI Accession 0162829 v2.2
description: published 2021-06-14T12:00:21Z
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description: Data Type: INVERTEBRATE SPECIES (measured); Units: count; Observation Type: laboratory analysis; Sampling Instrument: visual observation.
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description: Data Type: SPECIES IDENTIFICATION - COUNT (measured); Units: count; Observation Type: laboratory analysis; Sampling Instrument: visual observation.
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metadataMaintenance: (MD_MaintenanceInformation)
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maintenanceNote: Metadata are developed, maintained and distributed by NCEI. Updates are performed as needed to maintain currentness.
maintenanceNote: NCEI Accession 0162829 was revised and a new version of the archival package was published. Updates to existing archival packages may provide additional files or replace obsolete files. The latest version contains the most complete and up-to-date representation of this archival information package. All of the files received prior to this update are available in the preceding version of this accession. Please see journal.txt in the /about directory for additional details on changes made.
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organisationName: NOAA National Centers for Environmental Information
role: (CI_RoleCode) custodian
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acquisitionInformation: (MI_AcquisitionInformation)
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description: use as an observation type
instrument: (MI_Instrument)
identifier: (MD_Identifier)
code: visual observation
type: visual observation
description: not an instrument - maybe an observation type
