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Longline trap data collected during R/V Apalachee cruise AP-1307 in the DeSoto Canyon from 2013-07-18 to 2013-08-04 (NCEI Accession 0171495)


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      DateTime:  2023-08-07T17:36:51Z
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            title:  Longline trap data collected during R/V Apalachee cruise AP-1307 in the DeSoto Canyon from 2013-07-18 to 2013-08-04 (NCEI Accession 0171495)
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                date:  2018-04-05
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                  Anchor:  NCEI Accession ID 0171495
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                  Anchor:  https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/institution/details/1730 NOAA National Centers for Environmental Information
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                  Anchor:  https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/person/details/4846 Bipana Sigdel
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                  Anchor:  https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/institution/details/2186 Harte Research Institute for Gulf of Mexico Studies (HRI)
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                  Anchor:  https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/institution/details/1803 Gulf of Mexico Research Initiative Information & Data Cooperative (GRIIDC)
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                individualName:  Dean Grubbs
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                  Anchor:  https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/institution/details/719 Florida State University (FSU)
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                individualName:  Grubbs, R. Dean
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                  Anchor:  https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/institution/details/719 Florida State University / Coastal and Marine Laboratory
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                  Anchor:  https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/institution/details/719 Florida State University (FSU)
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        abstract:  This dataset reports species caught using longline and trap sets during R/V Apalachee cruise in the DeSoto Canyon from July 18 to August 4, 2013. Species data includes species name, sex, weight, length, and maturity state, if available. It also reports if samples were collected from individuals for other analysis, though the results of those analysis are not reported. Information about the longlines set includes bait used, gear, effort, and sea state. Additional files in the dataset report pressure and temperature data collected during longline trapping activities. The overall objectives of this research include using large chevron traps and demersal longlines to describe and examine differences in the species assemblages and relative abundances of demersal fishes associated with the eastern and western walls of DeSoto Canyon and the adjacent continental slope (75-2000 m deep), and collecting specimens and samples (including curation of new species) to aid in resolving phylogenetic uncertainties and understanding life history traits in collected taxa.
        purpose:  The purpose of this cruise was to evaluate the biological diversity and trophic interactions among organisms ranging from primary producers to apex predators and from the deep-sea benthos to the coast. These data contribute to a food web model used to determine risks to ecosystem structure and function and regional economies following from extreme anthropogenic events (e.g., discharged and background hydrocarbon) and adaptive management strategies.
        credit:  Related Funding Agency: Gulf of Mexico Research Initiative (GoMRI)
        credit:  Related Funding Agency: Gulf of Mexico Research Initiative Information & Data Cooperative
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            otherConstraints:  Cite as: Grubbs, R. Dean; Florida State University / Coastal and Marine Laboratory (2018). Longline trap data collected during R/V Apalachee cruise AP-1307 in the DeSoto Canyon from 2013-07-18 to 2013-08-04 (NCEI Accession 0171495). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0171495. Accessed [date].
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                title:  Species diversity of the deep-water gulper sharks (Squaliformes: Centrophoridae: Centrophorus) in North Atlantic waters - current status and taxonomic issues
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                    date:  2014
                    dateType:  (CI_DateTypeCode) publication
                identifier:  (MD_Identifier)
                    authority:  (CI_Citation)
                        title:  International DOI Foundation (IDF)
                        date: (inapplicable)
                    code: https://doi.org/10.1111/zoj.12194
                citedResponsibleParty:  (CI_ResponsibleParty)
                    positionName: (unknown)
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                            linkage: https://doi.org/10.1111/zoj.12194
                            protocol:  HTTPS
                            name: https://doi.org/10.1111/zoj.12194
                            description:  Veríssimo, A., Cotton, C. F., Buch, R. H., Guallart, J., & Burgess, G. H. (2014). Species diversity of the deep-water gulper sharks (Squaliformes: Centrophoridae: Centrophorus ) in North Atlantic waters - current status and taxonomic issues . Zoological Journal of the Linnean Society, 172(4), 803–830.https://doi.org/10.1111/zoj.12194
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                    individualName:  Verissimo, Ana
                    role:  (CI_RoleCode) author
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                    individualName:  Cotton, Charles F.
                    role:  (CI_RoleCode) author
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                    individualName:  Buch, Robert H.
                    role:  (CI_RoleCode) author
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                    individualName:  Guallart, Javier
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                    individualName:  Burgess, George H.
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                    organisationName:  Zoological Journal of the Linnean Society
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                    issueIdentification:  172 (4)
                otherCitationDetails:  pp. 803-830; published ahead of print November 27, 2014
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            initiativeType:  (DS_InitiativeTypeCode) sciencePaper
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                title:  Reproduction and embryonic development in two species of squaliform sharks, Centrophorus granulosus and Etmopterus princeps: Evidence of matrotrophy?
                date:  (CI_Date)
                    date:  2015
                    dateType:  (CI_DateTypeCode) publication
                identifier:  (MD_Identifier)
                    authority:  (CI_Citation)
                        title:  International DOI Foundation (IDF)
                        date: (inapplicable)
                    code: https://doi.org/10.1016/j.dsr2.2014.10.009
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                    positionName: (unknown)
                    contactInfo:  (CI_Contact)
                        onlineResource:  (CI_OnlineResource)
                            linkage: https://doi.org/10.1016/j.dsr2.2014.10.009
                            protocol:  HTTPS
                            name:  Reproduction and embryonic development in two species of squaliform sharks, Centrophorus granulosus and Etmopterus princeps: Evidence of matrotrophy?
                            description:  Cotton, C. F., Dean Grubbs, R., Dyb, J. E., Fossen, I., & Musick, J. A. (2015). Reproduction and embryonic development in two species of squaliform sharks, Centrophorus granulosus and Etmopterus princeps: Evidence of matrotrophy? Deep Sea Research Part II: Topical Studies in Oceanography, 115, 41–54. https://doi.org/10.1016/j.dsr2.2014.10.009
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                    individualName:  Cotton, Charles F.
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                    individualName:  Grubbs, Dean R..
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                    individualName:  Dyb, Jan E.
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                    individualName:  Fossen, Inge
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                    individualName:  Musick, John A.
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                    name:  Deep Sea Research Part II: Topical Studies in Oceanography
                    issueIdentification:  Volume 115
                otherCitationDetails:  pp. 41-54; published ahead of print November 8, 2014
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                title:  Longline trap data collected during R/V Apalachee cruise AP-1307 in the DeSoto Canyon from 2013-07-18 to 2013-08-04
                date:  (CI_Date)
                    date:  2014-01-21
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                        title:  International DOI Foundation (IDF)
                        date: (inapplicable)
                    code: https://doi.org/10.7266/n75x26xm
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                            linkage: https://doi.org/10.7266/N75X26XM
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                            name: https://doi.org/10.7266/N75X26XM
                            description:  GRIIDC Data Webpage
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                    individualName:  Grubbs, Dean R.
                    organisationName:  Florida State University / Coastal and Marine Laboratory
                    positionName:  Associate Director of Research
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                            electronicMailAddress:  dgrubbs@bio.fsu.edu
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                      Anchor:  https://data.gulfresearchinitiative.org Gulf of Mexico Research Initivative and Data Cooperative (GRIIDC)
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                            electronicMailAddress:  griidc@gomri.org
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                            name:  website
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        language:
          LanguageCode:  eng; USA
        characterSet:  (MD_CharacterSetCode) utf8
        topicCategory:  (MD_TopicCategoryCode) environment
        topicCategory:  (MD_TopicCategoryCode) oceans
        topicCategory:  (MD_TopicCategoryCode) climatologyMeteorologyAtmosphere
        topicCategory:  (MD_TopicCategoryCode) biota
        extent:  (EX_Extent)
            geographicElement:  (EX_GeographicBoundingBox)
                westBoundLongitude:  -88.96202
                eastBoundLongitude:  -85.69483
                southBoundLatitude:  28.64389
                northBoundLatitude:  29.55801
            temporalElement:  (EX_TemporalExtent)
                extent:
                  TimePeriod:
                    beginPosition:  2013-07-18
                    endPosition:  2013-08-04
        supplementalInformation:  Submission Package ID: 002MGF Data Parameters and Units: File AP-1307_MetadataQuery.csv contains: ID_Datasheet = Data sheet number, Vessel = R/V Apalachee, Event Date = DD-Month-YY, Set = Set Code (DC-YY-SetNumber), Deep-C Station = Deep-C Station Code, Latitude_start (decimal degrees), Longitude_start (decimal degrees), Latitude_finish (decimal degrees), Longitude_finish (decimal degrees), TDR = Serial number for Lotek temperature/depth recorder deployed on line, Temperature (degrees Celsius), Depth_min = minimum depth (meters) according to ship; later verified with TDR, Depth_max = maximum water depth (meters) according to ship; later verified with TDR, Actual Depth (meters), Time_in = (hhmm), Time_set (hhmm), Time_haul (hhmm), Time_out (hhmm), Longline/Trap/Both/Random = gear type used, Gear_Effort (longline) = sizes and numbers of hooks used per longline set, Gear_Effort (trap) = number/size and types of trap used per set, Bait = bait type used, SeaState (feet) = estimated wave height, Wind speed (knots) = estimated wind speed, Set comments = additional notes/measurements pertaining to each set, Sediment sample = whether or not a sediment was collected at the site of the set (true or false = yes or no), TDR data = Serial number for Lotek temperature/depth recorder deployed on line; File AP-1307_Sample_Data_Sheets.csv contains: Event_Date (MM/DD/YYYY), Vessel = R/V Apalachee, Set = Project-Year-Set Number [e.g., DC-13-### is the #### set on the Deep-C project for 2015], Deep-C Station (Name) = Deep-C station code, ID_sample (number) = specimen code (used to relate each sample back to a unique specimen identification code), ID_Data_sheet (number), ID_Data_sample (Project-Year-Sample Number) [e.g., DC-13-#### is the #### sample on the Deep-C project for 2013], ID_Species = scientific name of the species, Sex = male/female, BW Weight (kg), Liver Weight (g), SL = Standard Length for teleosts and pre-caudal length for sharks (cm), DW = Disk Width for batoid (cm), CW = Carapace Width for crustaceans (cm), CL = Carapace Length for crustaceans (cm), FL = Fork Length for telosts/sharks and disk length for batoid (cm), TL = Total Length for teleosts/batoids/crustaceans and stretched total length for sharks (cm), Mature = Yes, No, Maturity State = Mature, Juvenile, Neoteny, Pup, YOY (Young of Year), Tag number = dart or satellite tag number if released, Hook/Trap Size = hook/trap types and size, Condition = condition of swimming behavior if released E (excellent), G (good), F (fair), P (poor), DOA (dead), SI = Biopsy for stable isotope analyses (# of samples), GN = Genetics samples (# of samples), RP = Reproductive tract (Y if collected), WM = White muscle for purposes other than stable isotopes – e.g. mercury analyses (# of samples), BD = Blood (# of vials), BI = Bile (Y if collected), ST = Stomach (Y if collected), AG = Aging structure = S (spines), R (rays), O (otoliths), V (vertebrae), Other 1, Other 2 = Any additional tissues collected (e.g. radiocarbon), SP = Whole Specimen retained (Yes/No), VOU = Voucher Sample for museum curation (Yes if collected), Specimen Comments = Any additional notes/comments on specimen; Other csv files in the subdirectory “Temperature_Depth_Recorder_Data” reports data from a TDR (temperature depth recorder) that was deployed with an individual set: Rec# (record #), Date (MM/DD/YYYY), Time (HH:MM:SS), Pressure (dBars), IntTemp [C] = temperature (degrees Celsius); Cruise ID: AP-1307
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    distributionInfo:  (MD_Distribution)
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                  Anchor:  https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/institution/details/1730 NOAA National Centers for Environmental Information
                contactInfo:  (CI_Contact)
                    phone:  (CI_Telephone)
                        voice:  +1-301-713-3277
                    address:  (CI_Address)
                        electronicMailAddress:  NCEI.Info@noaa.gov
                role:  (CI_RoleCode) pointOfContact
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                fees:  In most cases, electronic downloads of the data are free. However, fees may apply for custom orders, data certifications, copies of analog materials, and data distribution on physical media.
                orderingInstructions:  Contact NCEI for other distribution options and instructions.
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                  Real:  6.912
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                    linkage: https://www.ncei.noaa.gov/archive/accession/0171495
                    protocol:  HTTPS
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                    description:  Navigate directly to the URL for a descriptive web page with download links.
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                    linkage: https://www.ncei.noaa.gov/archive/accession/oas/171495
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                    name:  Descriptive Information
                    description:  Navigate directly to the URL for a descriptive web page with download links.
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                    linkage: https://www.ncei.noaa.gov/archive/accession/download/171495
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                    applicationProfile:  Web browser
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                    description:  Navigate directly to the URL for data access and direct download.
                    function:  (CI_OnLineFunctionCode) download
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                    linkage: ftp://ftp-oceans.ncei.noaa.gov/nodc/archive/arc0118/0171495/
                    protocol:  FTP
                    applicationProfile:  Any FTP client
                    name:  FTP
                    description:  These data are available through the File Transfer Protocol (FTP). FTP is no longer supported by most internet browsers. You may copy and paste the FTP link to the data into an FTP client (e.g., FileZilla or WinSCP).
                    function:  (CI_OnLineFunctionCode) download
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    dataQualityInfo:  (DQ_DataQuality)
        scope:  (DQ_Scope)
            level:  (MD_ScopeCode) dataset
        lineage:  (LI_Lineage)
            processStep:  (LE_ProcessStep)
                description:  NCEI Accession 0171495 v1.1 was published.
                dateTime:
                  DateTime:  2018-04-05T19:04:19Z
                output:  (LE_Source)
                    sourceCitation:  (CI_Citation)
                        title:  NCEI Accession 0171495 v1.1
                        date:  (CI_Date)
                            date: (inapplicable)
                            dateType:  (CI_DateTypeCode) publication
                        citedResponsibleParty:  (CI_ResponsibleParty)
                            individualName: (inapplicable)
                            contactInfo:  (CI_Contact)
                                onlineResource:  (CI_OnlineResource)
                                    linkage: https://www.ncei.noaa.gov/archive/accession/0171495/1.1
                                    protocol:  HTTPS
                                    name:  NCEI Accession 0171495 v1.1
                                    description:  published 2018-04-05T19:04:19Z
                                    function:  (CI_OnLineFunctionCode) download
                            role: (inapplicable)
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    dataQualityInfo:  (DQ_DataQuality)
        scope:  (DQ_Scope)
            level:  (MD_ScopeCode) dataset
        lineage:  (LI_Lineage)
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > ANIMALS/VERTEBRATES > FISH (measured); Units: N/A; Observation Category: biological; Sampling Instrument: In Situ/Laboratory Instruments > Samplers > Grabbers/Traps/Collectors > TRAPS.
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: EARTH SCIENCE > ATMOSPHERE > ATMOSPHERIC PRESSURE (measured); Units: dbar; Observation Category: in situ; Sampling Instrument: Temperature Depth Recorder.
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: EARTH SCIENCE > ATMOSPHERE > ATMOSPHERIC WINDS > SURFACE WINDS > WIND SPEED (measured); Units: knots; Observation Category: in situ; Sampling Instrument: N/A; Sampling and Analyzing Method: estimated.
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: EARTH SCIENCE > OCEANS > OCEAN TEMPERATURE > WATER TEMPERATURE (measured); Units: degrees Celsius; Observation Category: in situ; Sampling Instrument: Temperature Depth Recorder.
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: EARTH SCIENCE > OCEANS > BATHYMETRY/SEAFLOOR TOPOGRAPHY > WATER DEPTH (measured); Units: meter; Observation Category: in situ; Sampling Instrument: Temperature Depth Recorder.
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: EARTH SCIENCE > OCEANS > OCEAN WAVES > SEA STATE (measured); Units: feet; Observation Category: in situ; Sampling Instrument: N/A; Sampling and Analyzing Method: estimated.
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: EARTH SCIENCE > OCEANS > OCEAN WAVES > WAVE HEIGHT (measured); Units: feet; Observation Category: in situ; Sampling Instrument: N/A; Sampling and Analyzing Method: estimated.
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: TEMPERATURE - WATER [WATER TEMPERATURE] (measured); Units: degrees Celsius; Observation Category: in situ; Sampling Instrument: Temperature Depth Recorder.
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: DEPTH - SENSOR (measured); Units: meter; Observation Category: in situ; Sampling Instrument: Temperature Depth Recorder.
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: PRESSURE - WATER [HYDROSTATIC PRESSURE] (measured); Units: dbar; Observation Category: in situ; Sampling Instrument: Temperature Depth Recorder.
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: WIND SPEED (measured); Units: knots; Observation Category: in situ; Sampling Instrument: N/A; Sampling and Analyzing Method: estimated.
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: SEA STATE (measured); Units: feet; Observation Category: in situ; Sampling Instrument: N/A; Sampling and Analyzing Method: estimated.
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: WAVE HEIGHT (measured); Units: feet; Observation Category: in situ; Sampling Instrument: N/A; Sampling and Analyzing Method: estimated.
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: FISH SPECIES (measured); Units: N/A; Observation Category: biological; Sampling Instrument: Longline Trap.
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: FISHERY SURVEY (measured); Units: N/A; Observation Category: biological; Sampling Instrument: trap.
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: FISHERY SURVEY - CATCH MEASUREMENTS - DETAILS (measured); Units: N/A; Observation Category: biological; Sampling Instrument: N/A.
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: FISHERY SURVEY (measured); Units: N; Observation Category: biological; Sampling Instrument: longline.
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    metadataMaintenance:  (MD_MaintenanceInformation)
        maintenanceAndUpdateFrequency:  (MD_MaintenanceFrequencyCode) asNeeded
        maintenanceNote:  Metadata are developed, maintained and distributed by NCEI. Updates are performed as needed to maintain currentness.
        contact:  (CI_ResponsibleParty)
            organisationName:  NOAA National Centers for Environmental Information
            role:  (CI_RoleCode) custodian
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    acquisitionInformation:  (MI_AcquisitionInformation)
        instrument:  (MI_Instrument)
            identifier:  (MD_Identifier)
                code:  trap
            type:  trap
            description:  generic type of instrument used to capture sediment, animals, etc.