Longline trap data collected during R/V Apalachee cruise AP-1415 in the DeSoto Canyon from 2014-10-02 to 2014-10-10 (NCEI Accession 0172589)
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title: Longline trap data collected during R/V Apalachee cruise AP-1415 in the DeSoto Canyon from 2014-10-02 to 2014-10-10 (NCEI Accession 0172589)
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abstract: This dataset reports species caught using longline and trap sets during the R/V Apalachee cruise AP-1415 from October 02 to October 10, 2014. The objectives of this project were 1) to use large chevron traps and demersal longlines to describe and examine differences in the species assemblages and relative abundances of demersal fishes associated with the eastern and western walls of DeSoto Canyon and the adjacent continental slope (75-2000 m deep), 2) to collect liver and bile samples from dominant species to examine spatial and depth-mediated differences in exposure to polycyclic aromatic hydrocarbons (PAHs), 3) to collect muscle tissue from all species for stable isotope analyses including using radiocarbon ratios to examine attenuation of long-term exposure to hydrocarbons, and 4) to collect specimens and samples (including curation of new species) to aid in resolving phylogenetic uncertainties and understanding life history traits in collected taxa. This dataset contains the metadata and sample data associated with these objectives.
purpose: The purpose of this cruise was to assess the influence of oil and gas on water column and sediment biogeochemical processes and the distribution of substances that affect biological productivity.
credit: Related Funding Agency: Gulf of Mexico Research Initiative (GoMRI)
credit: Related Funding Agency: Gulf of Mexico Research Initiative Information & Data Cooperative
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supplementalInformation: Submission Package ID: A5TWX8 Data Parameters and Units: AP-1415_MetadataQuery.csv file contains - Vessel = R/V Apalachee, Event ID = AP-1415, Event Date = DD-Month-YY, Set = DC-YY-SetNumber, Deep-C Station = Deep-C Station Code, Latitude_start (decimal degrees), Longitude_start (decimal degrees), Latitude_finish (decimal degrees), Longitude_finish (decimal degrees), TDR = Serial number for Lotek temperature/depth recorder deployed on line, DO (Dissolved Oxygen) meter was deployed = False/True, DO (Dissolved Oxygen) Concentration Value (ug/l), DO (Dissolved Oxygen Concentration Value (%), Temperature (degrees Celsius), Depth_min (meters), Time_in (mmss), Time_set (mmss), Time_ haul (mmss), Time_out (mmss), Longline/Trap/Both/Random = gear type used, Gear_Effort (longline) = hook sizes and count, Gear_Effort (trap) = number/size and types of trap used per set, Bait = bait type used, SeaState (feet), Wind speed (knots), Sediment sample = TRUE or FALSE, Set Comments = additional notes/measurements pertaining to each set; AP-1415_SampleData.csv file contains - event_id = AP-1415, Event_Date (MM/DD/YYYY), Set (Project-Year-Set Number) [e.g., DC-14-#### is the #### set on the Deep-C project for 2014], Deep-C Station (Name), ID_sample (number), ID_Data_sheet (number), ID_Data_sample (Project-Year-Sample Number) [e.g., DC-14-#### is the #### sample on the Deep-C project for 2014], ID_Species = scientific name, Sex = male/female, BW Weight (kg), Liver Weight (g), Core Temperature (degrees Celsius), SL = Standard Length for teleosts and pre-caudal length for sharks (cm), DW = Disk Width for batoid (cm), CW = Carapace Width for crustaceans (cm), CL = Carapace Length for crustaceans (cm), FL = Fork Length for telosts/sharks and disk length for batoid (cm), TL = Total Length for teleosts/batoids/crustaceans and stretched total length for sharks (cm), Mature = Yes, No, Maturity State = Mature, Juvenile, Neoteny, Pup, YOY (Young of Year), Tag number = dart or satellite tag number if released, Hook/Trap Size = hook size, Condition of swimming behavior if released = E (excellent), G (good), F (fair), P (poor), DOA (dead), SI = Biopsy for stable isotope analyses (# of samples), GN = Genetics samples (# of samples), RP = Reproductive tract (Y if collected), WM = White muscle for purposes other than stable isotopes – e.g. mercury analyses (# of samples), BD = Blood (# of vials), BI = Bile (Y if collected), ST = Stomach (Y if collected), AG = Aging structure = S (spines), R (rays), O (otoliths), V (vertebrae), Other 1, Other 2 = Any additional tissues collected (FSU liver, UNF liver, jaw, parasites), SP = Whole Specimen retained (Yes/No), VOU = Voucher Sample for museum curation (Yes if collected); Cruise ID: AP-1415
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description: Navigate directly to the URL for a descriptive web page with download links.
function: (CI_OnLineFunctionCode) information
onLine: (CI_OnlineResource)
linkage: https://www.ncei.noaa.gov/archive/accession/download/172589
protocol: HTTPS
applicationProfile: Web browser
name: HTTPS
description: Navigate directly to the URL for data access and direct download.
function: (CI_OnLineFunctionCode) download
onLine: (CI_OnlineResource)
linkage: ftp://ftp-oceans.ncei.noaa.gov/nodc/archive/arc0119/0172589/
protocol: FTP
applicationProfile: Any FTP client
name: FTP
description: These data are available through the File Transfer Protocol (FTP). FTP is no longer supported by most internet browsers. You may copy and paste the FTP link to the data into an FTP client (e.g., FileZilla or WinSCP).
function: (CI_OnLineFunctionCode) download
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dataQualityInfo: (DQ_DataQuality)
scope: (DQ_Scope)
level: (MD_ScopeCode) dataset
lineage: (LI_Lineage)
processStep: (LE_ProcessStep)
description: NCEI Accession 0172589 v1.1 was published.
dateTime:
DateTime: 2018-05-04T18:33:06Z
output: (LE_Source)
sourceCitation: (CI_Citation)
title: NCEI Accession 0172589 v1.1
date: (CI_Date)
date: (inapplicable)
dateType: (CI_DateTypeCode) publication
citedResponsibleParty: (CI_ResponsibleParty)
individualName: (inapplicable)
contactInfo: (CI_Contact)
onlineResource: (CI_OnlineResource)
linkage: https://www.ncei.noaa.gov/archive/accession/0172589/1.1
protocol: HTTPS
name: NCEI Accession 0172589 v1.1
description: published 2018-05-04T18:33:06Z
function: (CI_OnLineFunctionCode) download
role: (inapplicable)
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dataQualityInfo: (DQ_DataQuality)
scope: (DQ_Scope)
level: (MD_ScopeCode) dataset
lineage: (LI_Lineage)
processStep: (LE_ProcessStep)
description: Parameter or Variable: EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > ANIMALS/VERTEBRATES > FISH (measured); Units: N/A; Observation Category: biological; Sampling Instrument: In Situ/Laboratory Instruments > Samplers > Grabbers/Traps/Collectors > TRAPS.
processStep: (LE_ProcessStep)
description: Parameter or Variable: EARTH SCIENCE > ATMOSPHERE > ATMOSPHERIC WINDS > SURFACE WINDS > WIND SPEED (measured); Units: knots; Observation Category: in situ; Sampling Instrument: N/A; Sampling and Analyzing Method: estimated.
processStep: (LE_ProcessStep)
description: Parameter or Variable: EARTH SCIENCE > OCEANS > OCEAN TEMPERATURE > WATER TEMPERATURE (measured); Units: degrees Celsius; Observation Category: in situ; Sampling Instrument: Temperature Depth Recorder.
processStep: (LE_ProcessStep)
description: Parameter or Variable: EARTH SCIENCE > OCEANS > BATHYMETRY/SEAFLOOR TOPOGRAPHY > WATER DEPTH (measured); Units: meter; Observation Category: in situ; Sampling Instrument: Temperature Depth Recorder.
processStep: (LE_ProcessStep)
description: Parameter or Variable: EARTH SCIENCE > OCEANS > OCEAN WAVES > SEA STATE (measured); Units: feet; Observation Category: in situ; Sampling Instrument: N/A; Sampling and Analyzing Method: estimated.
processStep: (LE_ProcessStep)
description: Parameter or Variable: EARTH SCIENCE > OCEANS > OCEAN WAVES > WAVE HEIGHT (measured); Units: feet; Observation Category: in situ; Sampling Instrument: N/A; Sampling and Analyzing Method: estimated.
processStep: (LE_ProcessStep)
description: Parameter or Variable: TEMPERATURE - WATER [WATER TEMPERATURE] (measured); Units: degrees Celsius; Observation Category: in situ; Sampling Instrument: Temperature Depth Recorder.
processStep: (LE_ProcessStep)
description: Parameter or Variable: DEPTH - SENSOR (measured); Units: meter; Observation Category: in situ; Sampling Instrument: Temperature Depth Recorder.
processStep: (LE_ProcessStep)
description: Parameter or Variable: DISSOLVED OXYGEN (measured); Units: percent; Observation Category: in situ; Sampling Instrument: Dissolved Oxygen Meter.
processStep: (LE_ProcessStep)
description: Parameter or Variable: WIND SPEED (measured); Units: knot; Observation Category: in situ; Sampling Instrument: N/A; Sampling and Analyzing Method: estimated.
processStep: (LE_ProcessStep)
description: Parameter or Variable: SEA STATE (measured); Units: feet; Observation Category: in situ; Sampling Instrument: N/A; Sampling and Analyzing Method: estimated.
processStep: (LE_ProcessStep)
description: Parameter or Variable: WAVE HEIGHT (measured); Units: feet; Observation Category: in situ; Sampling Instrument: N/A; Sampling and Analyzing Method: estimated.
processStep: (LE_ProcessStep)
description: Parameter or Variable: FISH SPECIES (measured); Units: N/A; Observation Category: biological; Sampling Instrument: Longline Trap.
processStep: (LE_ProcessStep)
description: Parameter or Variable: FISHERY SURVEY (measured); Units: N/A; Observation Category: biological; Sampling Instrument: trap.
processStep: (LE_ProcessStep)
description: Parameter or Variable: FISHERY SURVEY - CATCH MEASUREMENTS - DETAILS (measured); Units: N/A; Observation Category: biological; Sampling Instrument: Longline Trap.
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metadataMaintenance: (MD_MaintenanceInformation)
maintenanceAndUpdateFrequency: (MD_MaintenanceFrequencyCode) asNeeded
maintenanceNote: Metadata are developed, maintained and distributed by NCEI. Updates are performed as needed to maintain currentness.
contact: (CI_ResponsibleParty)
organisationName: NOAA National Centers for Environmental Information
role: (CI_RoleCode) custodian
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acquisitionInformation: (MI_AcquisitionInformation)
instrument: (MI_Instrument)
identifier: (MD_Identifier)
code: trap
type: trap
description: generic type of instrument used to capture sediment, animals, etc.