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CTD, plankton relative abundance, and quantitative phytoplankton profiles data collected from R/V Bellows cruise BE-1307 in the Gulf of Mexico from 2012-10-13 to 2012-10-15 (NCEI Accession 0175369)


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            title:  CTD, plankton relative abundance, and quantitative phytoplankton profiles data collected from R/V Bellows cruise BE-1307 in the Gulf of Mexico from 2012-10-13 to 2012-10-15 (NCEI Accession 0175369)
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                date:  2018-08-21
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                date:  2018-12-17
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                  Anchor:  https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/institution/details/1730 NOAA National Centers for Environmental Information
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                  Anchor:  https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/person/details/4846 Bipana Sigdel
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                  Anchor:  https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/institution/details/2186 Harte Research Institute for Gulf of Mexico Studies (HRI)
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                  Anchor:  https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/institution/details/1803 Gulf of Mexico Research Initiative Information & Data Cooperative (GRIIDC)
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                individualName:  James Nienow
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        abstract:  This dataset contains CTD, plankton species relative abundance, and quantitative phytoplankton profiles data collected from 9 sites off the Florida Panhandle at the head of DeSoto Canyon, Gulf of Mexico aboard the R/V Bellows cruise BE-1307 from 2012-10-13 to 2012-10-15. Plankton samples were collected using a net with mesh size of 25 micrometer and 0.5m diameter. Plankton abundance data reports the location, date, time, and length of tow for each sample. Plankton species are categorized as Ceratium spp., Dinophysis spp., other dinoflagellates, Chaetoceros spp., Rhizosolenia/Guinardia, Eucampia/Hemiaulus, other chain-forming diatoms, Thalassionema spp., Nitzschioid diatoms, other diatoms, Cyanobacteria (Trichodesmium spp.), and Zooplankton. Abundances were recorded as individual counts as well as percentages of total sample. Diatoms and dinoflagellates were counted as cells, cyanobacteria as colonies/filaments, zooplankton as individuals. Quantitative phytoplankton profiles were taken specifically at 5 sites (P1, P3, P5, P7, D1) along the Pensacola transect. For this, one-liter samples were collected from the surface and at different depths using Niskin bottles. Samples were filtered onto a 0.45 micrometer nitrocellulose filter and air-dried. A portion of each filter was mounted on an aluminum stub, sputter-coated, and examined with a JEOL JSM-6480 LV scanning electron microscope. Diatoms, coccolithophores, and armored dinoflagellates were identified to the lowest possible taxonomic category. The number of cells of each taxon in a field of view at a magnification of 1000x was recorded, with up to 700 fields-of-view examined, depending on the density of phytoplankton in the sample. The dataset includes the depth, the volume filtered, the number of cells of each taxon counted, and the calculated abundance of each taxon in cells per liter. Micrographs taken during the analysis are included.
        purpose:  The purpose of this cruise was to evaluate the biological diversity and trophic interactions among organisms ranging from primary producers to apex predators and from the deep-sea benthos to the coast. Another objective was to develop phytoplankton profiles as baseline for future studies. These data contribute to a food web model used to determine risks to ecosystem structure and function and regional economies following from extreme anthropogenic events (e.g., discharged and background hydrocarbon) and adaptive management strategies.
        credit:  Related Funding Agency: Gulf of Mexico Research Initiative (GoMRI)
        credit:  Related Funding Agency: Gulf of Mexico Research Initiative Information & Data Cooperative
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            keyword:  Species relative abundance
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            keyword:  Water depth profiles
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            keyword:  SBE 25
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                citedResponsibleParty:  (CI_ResponsibleParty)
                    individualName:  James Nienow
                    organisationName:  Valdosta State University Department of Biology
                    contactInfo:  (CI_Contact)
                        address:  (CI_Address)
                            electronicMailAddress:  jnienow@valdosta.edu
                    role:  (CI_RoleCode) author
                citedResponsibleParty:  (CI_ResponsibleParty)
                    organisationName:
                      Anchor:  https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/institution/details/1803 Gulf of Mexico Research Initiative Information & Data Cooperative (GRIIDC)
                    contactInfo:  (CI_Contact)
                        address:  (CI_Address)
                            electronicMailAddress:  griidc@gomri.org
                        onlineResource:  (CI_OnlineResource)
                            linkage: https://data.gulfresearchinitiative.org/
                            protocol:  HTTPS
                            name:  Gulf of Mexico Research Initiative Information & Data Cooperative website
                            description:  Institution web page
                            function:  (CI_OnLineFunctionCode) information
                    role:  (CI_RoleCode) publisher
                presentationForm:  (CI_PresentationFormCode) tableDigital
            associationType:  (DS_AssociationTypeCode) crossReference
            initiativeType:  (DS_InitiativeTypeCode) project
        language:
          LanguageCode:  eng; USA
        characterSet:  (MD_CharacterSetCode) utf8
        topicCategory:  (MD_TopicCategoryCode) environment
        topicCategory:  (MD_TopicCategoryCode) oceans
        topicCategory:  (MD_TopicCategoryCode) biota
        extent:  (EX_Extent)
            geographicElement:  (EX_GeographicBoundingBox)
                westBoundLongitude:  -87.25
                eastBoundLongitude:  -86.66667
                southBoundLatitude:  29.29333
                northBoundLatitude:  30.33333
            temporalElement:  (EX_TemporalExtent)
                extent:
                  TimePeriod:
                    beginPosition:  2012-10-13
                    endPosition:  2012-10-15
        supplementalInformation:  Submission Package ID: MA1D9A In this accession, NCEI has archived multiple versions of these data. The latest (and best) version of these data has the largest version number.
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    distributionInfo:  (MD_Distribution)
        distributor:  (MD_Distributor)
            distributorContact:  (CI_ResponsibleParty)
                organisationName:
                  Anchor:  https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/institution/details/1730 NOAA National Centers for Environmental Information
                contactInfo:  (CI_Contact)
                    phone:  (CI_Telephone)
                        voice:  +1-301-713-3277
                    address:  (CI_Address)
                        electronicMailAddress:  NCEI.Info@noaa.gov
                role:  (CI_RoleCode) pointOfContact
            distributionOrderProcess:  (MD_StandardOrderProcess)
                fees:  In most cases, electronic downloads of the data are free. However, fees may apply for custom orders, data certifications, copies of analog materials, and data distribution on physical media.
                orderingInstructions:  Contact NCEI for other distribution options and instructions.
            distributorFormat:  (MD_Format)
                name:  TIFF
                version: (unknown)
            distributorFormat:  (MD_Format)
                name:  CSV
                version: (unknown)
            distributorFormat:  (MD_Format)
                name:  Sea-Bird CTD
                version:  SBE 25
            distributorFormat:  (MD_Format)
                name:  DOCX
                version: (unknown)
            distributorFormat:  (MD_Format)
                name:  netCDF
                version:  netCDF-4
                specification:  NCEI_NetCDF_Profile_Template_v2.0, ACDD-1.3, CF-1.6
            distributorFormat:  (MD_Format)
                name:  XLSX
                version: (unknown)
            distributorTransferOptions:  (MD_DigitalTransferOptions)
                transferSize:
                  Real:  2494.428
                onLine:  (CI_OnlineResource)
                    linkage: https://www.ncei.noaa.gov/archive/accession/0175369
                    protocol:  HTTPS
                    applicationProfile:  Web browser
                    name:  NCEI Dataset Landing Page
                    description:  Navigate directly to the URL for a descriptive web page with download links.
                    function:  (CI_OnLineFunctionCode) information
                onLine:  (CI_OnlineResource)
                    linkage: https://www.ncei.noaa.gov/archive/accession/oas/175369
                    protocol:  HTTPS
                    applicationProfile:  Web browser
                    name:  Descriptive Information
                    description:  Navigate directly to the URL for a descriptive web page with download links.
                    function:  (CI_OnLineFunctionCode) information
                onLine:  (CI_OnlineResource)
                    linkage: https://www.ncei.noaa.gov/archive/accession/download/175369
                    protocol:  HTTPS
                    applicationProfile:  Web browser
                    name:  HTTPS
                    description:  Navigate directly to the URL for data access and direct download.
                    function:  (CI_OnLineFunctionCode) download
                onLine:  (CI_OnlineResource)
                    linkage: ftp://ftp-oceans.ncei.noaa.gov/nodc/archive/arc0123/0175369/
                    protocol:  FTP
                    applicationProfile:  Any FTP client
                    name:  FTP
                    description:  These data are available through the File Transfer Protocol (FTP). FTP is no longer supported by most internet browsers. You may copy and paste the FTP link to the data into an FTP client (e.g., FileZilla or WinSCP).
                    function:  (CI_OnLineFunctionCode) download
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    dataQualityInfo:  (DQ_DataQuality)
        scope:  (DQ_Scope)
            level:  (MD_ScopeCode) dataset
        lineage:  (LI_Lineage)
            processStep:  (LE_ProcessStep)
                description:  NCEI Accession 0175369 v1.1 was published.
                dateTime:
                  DateTime:  2018-08-21T14:11:20Z
                output:  (LE_Source)
                    sourceCitation:  (CI_Citation)
                        title:  NCEI Accession 0175369 v1.1
                        date:  (CI_Date)
                            date: (inapplicable)
                            dateType:  (CI_DateTypeCode) publication
                        citedResponsibleParty:  (CI_ResponsibleParty)
                            individualName: (inapplicable)
                            contactInfo:  (CI_Contact)
                                onlineResource:  (CI_OnlineResource)
                                    linkage: https://www.ncei.noaa.gov/archive/accession/0175369/1.1
                                    protocol:  HTTPS
                                    name:  NCEI Accession 0175369 v1.1
                                    description:  published 2018-08-21T14:11:20Z
                                    function:  (CI_OnLineFunctionCode) download
                            role: (inapplicable)
            processStep:  (LE_ProcessStep)
                description:  NCEI Accession 0175369 was revised and v2.2 was published.
                rationale:  Updates were received for this dataset. These updates were copied into the data/0-data/ directory of this accession. These updates may provide additional files or replace obsolete files. This version contains the most complete and up-to-date representation of this archival information package. All of the files received prior to this update are available in the preceding version of this accession.
                dateTime:
                  DateTime:  2018-12-17T15:44:39Z
                output:  (LE_Source)
                    sourceCitation:  (CI_Citation)
                        title:  NCEI Accession 0175369 v2.2
                        date:  (CI_Date)
                            date: (inapplicable)
                            dateType:  (CI_DateTypeCode) publication
                        citedResponsibleParty:  (CI_ResponsibleParty)
                            individualName: (inapplicable)
                            contactInfo:  (CI_Contact)
                                onlineResource:  (CI_OnlineResource)
                                    linkage: https://www.ncei.noaa.gov/archive/accession/0175369/2.2
                                    protocol:  HTTPS
                                    name:  NCEI Accession 0175369 v2.2
                                    description:  published 2018-12-17T15:44:39Z
                                    function:  (CI_OnLineFunctionCode) download
                            role: (inapplicable)
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    dataQualityInfo:  (DQ_DataQuality)
        scope:  (DQ_Scope)
            level:  (MD_ScopeCode) dataset
        lineage:  (LI_Lineage)
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: PLANKTON (measured); Units: cells/liter; Observation Category: plankton; Sampling Instrument: Plankton net.
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: Taxonomy (measured); Units: na; Observation Category: laboratory analysis; Sampling Instrument: na.
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: Ecology (measured); Units: na; Observation Category: laboratory analysis; Sampling Instrument: na.
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: Species relative abundance (measured); Units: count of cells; Observation Category: plankton abundance; Sampling Instrument: na.
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: water depth (measured); Units: na; Observation Category: profile; Sampling Instrument: na.
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: ZOOPLANKTON (measured); Units: cell/liter; Observation Category: in situ; Sampling Instrument: Niskin bottle.
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: EARTH SCIENCE > BIOSPHERE > ECOSYSTEMS > AQUATIC ECOSYSTEMS > PLANKTON > PHYTOPLANKTON (measured); Units: cell/liter; Observation Category: laboratory analysis; Sampling Instrument: Niskin bottle.
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: CONDUCTIVITY (measured); Units: Siemens/meter; Observation Category: in situ; Sampling Instrument: CTD.
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: SALINITY (measured); Units: psu; Observation Category: in situ; Sampling Instrument: CTD.
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: TEMPERATURE - WATER - CONTINUOUS MEASUREMENT [WATER TEMPERATURE] (measured); Units: degrees C; Observation Category: in situ; Sampling Instrument: CTD.
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: OXYGEN (measured); Units: milligrams/liter; Observation Category: in situ; Sampling Instrument: SBE 43.
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: OXYGEN - PERCENT SATURATION (measured); Units: percent; Observation Category: in situ; Sampling Instrument: CTD.
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: OXYGEN Saturation (measured); Units: milligrams/liter; Observation Category: in situ; Sampling Instrument: CTD.
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: PRESSURE - WATER [HYDROSTATIC PRESSURE] (measured); Units: dbar; Observation Category: in situ; Sampling Instrument: CTD; Sampling and Analyzing Method: strain gauge.
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: FLUORESCENCE (measured); Units: milligrams/cubic meter; Observation Category: in situ; Sampling Instrument: CDOM.
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: FLUORESCENCE (measured); Units: milligrams/cubic meter; Observation Category: in situ; Sampling Instrument: fluorometer.
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: turbidity (measured); Units: N/A; Observation Category: in situ; Sampling Instrument: Nephelometric Turbidity Unit.
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    metadataMaintenance:  (MD_MaintenanceInformation)
        maintenanceAndUpdateFrequency:  (MD_MaintenanceFrequencyCode) asNeeded
        maintenanceNote:  Metadata are developed, maintained and distributed by NCEI. Updates are performed as needed to maintain currentness.
        maintenanceNote:  NCEI Accession 0175369 was revised and a new version of the archival package was published. Updates to existing archival packages may provide additional files or replace obsolete files. The latest version contains the most complete and up-to-date representation of this archival information package. All of the files received prior to this update are available in the preceding version of this accession. Please see journal.txt in the /about directory for additional details on changes made.
        contact:  (CI_ResponsibleParty)
            organisationName:  NOAA National Centers for Environmental Information
            role:  (CI_RoleCode) custodian
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    acquisitionInformation:  (MI_AcquisitionInformation)
        instrument:  (MI_Instrument)
            identifier:  (MD_Identifier)
                code:  CTD
            type:  CTD
            description:  Conductivity-Temperature-Depth probe
        instrument:  (MI_Instrument)
            identifier:  (MD_Identifier)
                code:  fluorometer
            type:  fluorometer
            description:  fluorometer
        instrument:  (MI_Instrument)
            identifier:  (MD_Identifier)
                code:  net - plankton net
            type:  net - plankton net
            description:  net - plankton net
        instrument:  (MI_Instrument)
            identifier:  (MD_Identifier)
                code:  Niskin bottle
            type:  Niskin bottle
            description:  Device for obtaining samples of seawater at a specific depth Why special entry for Niskin bottle but no entry for Nansen bottle?
        platform:  (MI_Platform)
            identifier:  (MD_Identifier)
                code:  BELLOWS
            description:  BELLOWS
            instrument: (missing)