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National Coral Reef Monitoring Program: Benthic cover derived from analysis of images collected from climate stations across the Pacific Remote Island Areas


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            title:  National Coral Reef Monitoring Program: Benthic cover derived from analysis of images collected from climate stations across the Pacific Remote Island Areas
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        abstract:  The benthic cover data in this collection result from analyzing the images produced from ongoing National Coral Reef Monitoring Program (NCRMP) benthic photo-quadrat surveys conducted along transects at climate stations and permanent sites identified by the Ocean and Climate Change team across the Pacific Remote Island Areas. Benthic habitat imagery were quantitatively analyzed using Coral Point Count with Excel extensions (CPCe; Kohler and Gill, 2006) software from 2010-2014 and a web-based annotation tool called CoralNet (Beijbom et al. 2015) from 2015 to present. In general, images are analyzed to produce three functional group levels of benthic cover: Tier 1 (e.g., hard coral, soft coral, macroalgae, turf algae, etc.), Tier 2 (e.g., Hard Coral = massive, branching, foliose, encrusting, etc.; Macroalgae = upright macroalgae, encrusting macroalgae, bluegreen macroalgae, and Halimeda, etc.), and Tier 3 (e.g., Hard Coral = Astreopora sp, Favia sp, Pocillopora, etc.; Macroalgae = Caulerpa sp, Dictyosphaeria sp, Padina sp, etc.). The imagery analyzed in order to produce the benthic cover data is also included in this collection.
        purpose:  The NOAA National Coral Reef Monitoring Program (NCRMP) details a long term approach to provide an ecosystem perspective via monitoring climate, fish, benthic, and socioeconomic variables in a consistent and integrated manner. The NCRMP is intended to coordinate various NOAA Coral Reef Conservation Program (CRCP) biological, physical, and human dimensions activities into a cohesive NOAA-wide effort. Through the implementation of the NCRMP, NOAA will be able to clearly and concisely communicate results of national-scale monitoring to national, state, and territorial policy makers, resource managers, and the public on a periodic basis. To support a long-term Coral Reef Conservation Program for sustainable management and conservation of coral reef ecosystems and the NOAA Ocean Acidification Program (OAP), total alkalinity and dissolved inorganic carbon are measured to calculate various inorganic carbon system parameters that influence coral reef ecosystems monitored by the NOAA Coral Reef Ecosystem Program (CREP). SCUBA divers take discrete water samples at the benthos and at the surface at forereef study sites established by the ongoing Pacific Reef Assessment and Monitoring Program (RAMP).
        credit:  Related Funding Agency: NOAA Coral Reef Conservation Program
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            keyword:
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            keyword:
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                title:  NODC SUBMITTING INSTITUTION NAMES THESAURUS
                date: (inapplicable)
        descriptiveKeywords:  (MD_Keywords)
            keyword:
              Anchor:  https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/project/details/670 American Samoa Reef and Assessment Monitoring Program (ASRAMP)
            keyword:
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            keyword:
              Anchor:  https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/project/details/302 CORAL REEF STUDIES
            keyword:
              Anchor:  https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/project/details/693 National Coral Reef Monitoring Program (NCRMP)
            keyword:
              Anchor:  https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/project/details/669 Pacific Reef and Assessment Monitoring Program (Pacific RAMP)
            type:  (MD_KeywordTypeCode) project
            thesaurusName:  (CI_Citation)
                title:  NODC PROJECT NAMES THESAURUS
                date: (inapplicable)
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            keyword:
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            keyword:
              Anchor:  https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/seaname/details/107 South Pacific Ocean
            type:  (MD_KeywordTypeCode) place
            thesaurusName:  (CI_Citation)
                title:  NODC SEA AREA NAMES THESAURUS
                date: (inapplicable)
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            keyword:  oceanography
            type:  (MD_KeywordTypeCode) theme
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                title:  WMO_CategoryCode
                date:  (CI_Date)
                    date:  2012-09-15
                    dateType:  (CI_DateTypeCode) publication
        descriptiveKeywords:  (MD_Keywords)
            keyword:  CRED
            keyword:  CREP
            keyword:  Coral Reef Ecosystem Division
            keyword:  Coral Reef Ecosystem Program
            keyword:  ESD
            keyword:  Ecosystem Sciences Division
            keyword:  PIFSC
            keyword:  Pacific Islands Fisheries Science Center
            type:  (MD_KeywordTypeCode) dataCentre
            thesaurusName:  (CI_Citation)
                title:  Contributing Data Centers
                date: (inapplicable)
        descriptiveKeywords:  (MD_Keywords)
            keyword:
              Anchor:  https://gcmd.earthdata.nasa.gov/kms/concept/85c2a291-71e2-4b51-811b-e469ed6c065c DOC/NOAA/NMFS > National Marine Fisheries Service, NOAA, U.S. Department of Commerce
            keyword:
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            type:  (MD_KeywordTypeCode) dataCentre
            thesaurusName:  (CI_Citation)
                title:  Global Change Master Directory (GCMD) Data Center Keywords
                date:  (CI_Date)
                    date:  2023
                    dateType:  (CI_DateTypeCode) revision
                edition:  17
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                            city:  Greenbelt
                            administrativeArea:  MD
                        onlineResource:  (CI_OnlineResource)
                            linkage: https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
                            protocol:  HTTPS
                            name:  GCMD Keyword Forum Page
                            description:  Global Change Master Directory (GCMD). 2023. GCMD Keywords, Version 17. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords
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        descriptiveKeywords:  (MD_Keywords)
            keyword:  743
            keyword:  National Coral Reef Monitoring Program
            keyword:  National Coral Reef Monitoring Program (NCRMP)
            type:  (MD_KeywordTypeCode) project
            thesaurusName:  (CI_Citation)
                title:  CRCP Project
                date: (inapplicable)
        descriptiveKeywords:  (MD_Keywords)
            keyword:  Numeric Data Sets > Benthic
            keyword:  Visual Images > Habitats
            type:  (MD_KeywordTypeCode) theme
            thesaurusName:  (CI_Citation)
                title:  CoRIS Discovery Thesaurus
                date: (inapplicable)
        descriptiveKeywords:  (MD_Keywords)
            keyword:  EARTH SCIENCE > Biosphere > Aquatic Habitat > Benthic Habitat
            keyword:  EARTH SCIENCE > Biosphere > Aquatic Habitat > Reef Habitat
            keyword:  EARTH SCIENCE > Biosphere > Microbiota > Blue-green Algae
            keyword:  EARTH SCIENCE > Biosphere > Vegetation > Algae > Algal Cover
            keyword:  EARTH SCIENCE > Biosphere > Vegetation > Algae > Crustose Coralline Algae
            keyword:  EARTH SCIENCE > Biosphere > Vegetation > Algae > Encrusting Macroalgae
            keyword:  EARTH SCIENCE > Biosphere > Vegetation > Algae > Turf Algae
            keyword:  EARTH SCIENCE > Biosphere > Zoology > Corals
            keyword:  EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment
            keyword:  EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > Baseline studies
            keyword:  EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > Benthos Analysis
            keyword:  EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > Benthos Analysis > Quadrat Monitoring > Photograph Analysis
            keyword:  EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > Benthos Analysis > Transect Monitoring > Belt Transect
            keyword:  EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > Benthos Analysis > Transect monitoring
            keyword:  EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > In Situ Biological
            keyword:  EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > Photographic Analysis
            keyword:  EARTH SCIENCE > Biosphere > Zoology > Corals > Reef Monitoring and Assessment > Rapid Assessment Studies
            keyword:  EARTH SCIENCE > Biosphere > Zoology > Mollusks > Tridacna
            keyword:  EARTH SCIENCE > Biosphere > Zoology > Sponges
            keyword:  EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs > Coral Reef Ecology
            keyword:  EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs > Coral Reef Ecology > Benthic biology
            keyword:  EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs > Coral Reef Ecology > Coral Cover
            keyword:  EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs > Coral Reef Ecology > Hard Coral Cover
            keyword:  EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs > Coral Reef Ecology > Hard Coral Cover Live percentage
            keyword:  EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs > Coral Reef Ecology > OctoCoral Cover
            keyword:  EARTH SCIENCE > Oceans > Coastal Processes > Coral Reefs > Coral Reef Ecology > Rugosity
            keyword:  EARTH SCIENCE > Oceans > Marine Biology > Coral
            keyword:  EARTH SCIENCE > Oceans > Marine Biology > Coral Communities
            keyword:  EARTH SCIENCE > Oceans > Marine Biology > Macroinvertebrates
            keyword:  EARTH SCIENCE > Oceans > Marine Biology > Marine Invertebrates
            keyword:  EARTH SCIENCE > Oceans > Marine Biology > Marine Invertebrates > Macroinvertebrates
            keyword:  EARTH SCIENCE > Oceans > Marine Biology > Marine Plants > Seagrass
            keyword:  EARTH SCIENCE > Oceans > Ocean Chemistry > Climate Change
            type:  (MD_KeywordTypeCode) theme
            thesaurusName:  (CI_Citation)
                title:  CoRIS Theme Thesaurus
                date: (inapplicable)
        descriptiveKeywords:  (MD_Keywords)
            keyword:
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            keyword:
              Anchor:  https://gcmd.earthdata.nasa.gov/kms/concept/09a78997-581b-4d1b-ae71-b2b3f96ef719 EARTH SCIENCE > BIOSPHERE > ECOSYSTEMS > MARINE ECOSYSTEMS > BENTHIC
            keyword:
              Anchor:  https://gcmd.earthdata.nasa.gov/kms/concept/ad497e7a-48fa-45e1-90a5-b052508bdb30 EARTH SCIENCE > OCEANS > COASTAL PROCESSES > CORAL REEFS
            keyword:
              Anchor:  https://gcmd.earthdata.nasa.gov/kms/concept/dff4d4af-e1e0-4991-884b-a1c088a802b2 EARTH SCIENCE > SOLID EARTH > GEOMORPHIC LANDFORMS/PROCESSES > COASTAL LANDFORMS > CORAL REEFS
            keyword:
              Anchor:  https://gcmd.earthdata.nasa.gov/kms/concept/03f0c0a3-04a7-4ef8-8ec0-3c2266510815 EARTH SCIENCE > SPECTRAL/ENGINEERING > VISIBLE WAVELENGTHS > VISIBLE IMAGERY
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                title:  Global Change Master Directory (GCMD) Science Keywords
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                    date:  2023
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                edition:  17
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                            city:  Greenbelt
                            administrativeArea:  MD
                        onlineResource:  (CI_OnlineResource)
                            linkage: https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
                            protocol:  HTTPS
                            name:  GCMD Keyword Forum Page
                            description:  Global Change Master Directory (GCMD). 2023. GCMD Keywords, Version 17. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords
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        descriptiveKeywords:  (MD_Keywords)
            keyword:
              Anchor:  https://gcmd.earthdata.nasa.gov/kms/concept/33de4965-928a-45d5-acfc-79e006842431 CAMERA > CAMERA
            type:  (MD_KeywordTypeCode) instrument
            thesaurusName:  (CI_Citation)
                title:  Global Change Master Directory (GCMD) Instrument Keywords
                date:  (CI_Date)
                    date:  2023
                    dateType:  (CI_DateTypeCode) revision
                edition:  17
                citedResponsibleParty:  (CI_ResponsibleParty)
                    organisationName:  Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA)
                    contactInfo:  (CI_Contact)
                        address:  (CI_Address)
                            city:  Greenbelt
                            administrativeArea:  MD
                        onlineResource:  (CI_OnlineResource)
                            linkage: https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
                            protocol:  HTTPS
                            name:  GCMD Keyword Forum Page
                            description:  Global Change Master Directory (GCMD). 2023. GCMD Keywords, Version 17. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords
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            keyword:  CoralNet
            type:  (MD_KeywordTypeCode) instrument
            thesaurusName:  (CI_Citation)
                title:  Provider Instruments
                date: (inapplicable)
        descriptiveKeywords:  (MD_Keywords)
            keyword:
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            type:  (MD_KeywordTypeCode) platform
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                title:  Global Change Master Directory (GCMD) Platform Keywords
                date:  (CI_Date)
                    date:  2023
                    dateType:  (CI_DateTypeCode) revision
                edition:  17
                citedResponsibleParty:  (CI_ResponsibleParty)
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                            city:  Greenbelt
                            administrativeArea:  MD
                        onlineResource:  (CI_OnlineResource)
                            linkage: https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
                            protocol:  HTTPS
                            name:  GCMD Keyword Forum Page
                            description:  Global Change Master Directory (GCMD). 2023. GCMD Keywords, Version 17. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords
                            function:  (CI_OnLineFunctionCode) information
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        descriptiveKeywords:  (MD_Keywords)
            keyword:
              Anchor:  https://vocab.ices.dk/services/pox/GetCodeDetail/SHIPC/33HL Hi'ialakai (call sign: WTEY, ICES code: 33HL, 2004)
            keyword:
              Anchor:  https://vocab.ices.dk/services/pox/GetCodeDetail/SHIPC/315R RAINIER (call sign: WTEF, ICES code: 315R, 1968)
            type:  (MD_KeywordTypeCode) platform
            thesaurusName:  (CI_Citation)
                title:  ICES/SeaDataNet Ship Codes
                date: (inapplicable)
        descriptiveKeywords:  (MD_Keywords)
            keyword:  COUNTRY/TERRITORY > United States of America > USA Minor Outlying Islands > Baker Island (00N176W0001)
            keyword:  COUNTRY/TERRITORY > United States of America > USA Minor Outlying Islands > Howland Island (00S176W0001)
            keyword:  COUNTRY/TERRITORY > United States of America > USA Minor Outlying Islands > Jarvis Island (00S160W0001)
            keyword:  COUNTRY/TERRITORY > United States of America > USA Minor Outlying Islands > Johnston Atoll (16N169W0001)
            keyword:  COUNTRY/TERRITORY > United States of America > USA Minor Outlying Islands > Kingman Reef (06N162W0001)
            keyword:  COUNTRY/TERRITORY > United States of America > USA Minor Outlying Islands > Palmyra Atoll (05N162W0001)
            keyword:  COUNTRY/TERRITORY > United States of America > USA Minor Outlying Islands > Wake Atoll (19N167E0001)
            keyword:  OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Baker Island > Baker Island (00N176W0001)
            keyword:  OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Howland Island > Howland Island (00S176W0001)
            keyword:  OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Johnston Atoll > Johnston Atoll (16N169W0001)
            keyword:  OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Line Islands > Jarvis Island (00S160W0001)
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            keyword:  OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Line Islands > Palmyra Atoll (05N162W0001)
            keyword:  OCEAN BASIN > Pacific Ocean > Central Pacific Ocean > Wake Atoll > Wake Atoll (19N167E0001)
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            thesaurusName:  (CI_Citation)
                title:  CoRIS Place Thesaurus
                date: (inapplicable)
        descriptiveKeywords:  (MD_Keywords)
            keyword:
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                    date:  2023
                    dateType:  (CI_DateTypeCode) revision
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                            linkage: https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
                            protocol:  HTTPS
                            name:  GCMD Keyword Forum Page
                            description:  Global Change Master Directory (GCMD). 2023. GCMD Keywords, Version 17. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords
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            keyword:  PRIMN
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            keyword:  Pacific Remote Islands Marine National Monument
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                title:  Provider Place Names
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                title:  Coral Reef Conservation Program (2016). Documentation for NOAA's Coral Reef Conservation Program (CRCP) National Coral Reef Monitoring Program (NCRMP) data archived at NCEI (NCEI Accession 0157633). NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0157633.
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                    date:  2016-12-22
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                            electronicMailAddress:  coralreef@noaa.gov
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                title:  Pacific Islands Fisheries Science Center, 2021: National Coral Reef Monitoring Program: Benthic Cover from Annotated Benthic Images Collected During Photoquadrat Surveys at Climate Stations across the Pacific Remote Island Areas since 2014, https://www.fisheries.noaa.gov/inport/item/36148.
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                title:  Kohler, K. E., & Gill, S. M. (2006). Coral Point Count with Excel extensions (CPCe): A Visual Basic program for the determination of coral and substrate coverage using random point count methodology. Computers & Geosciences, 32(9), 1259–1269. https://doi.org/10.1016/j.cageo.2005.11.009
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                title:  Towards Automated Annotation of Benthic Survey Images: Variability of Human Experts and Operational Modes of Automation
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                    date:  2015-07-08
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        topicCategory:  (MD_TopicCategoryCode) biota
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        supplementalInformation:  Accessions 0159139, 0159145, 0159155, 0159152, 0187562, 0202139, 0202300, 0239474, 0289907. Climate stations are 3-4 sites per island that were selected in a stratified random fashion to be roughly equally spaced around the island, along the 15 m contour, on hard bottom, and at least 1 km away from a river mouth or embayment. Once selected we assess multiple features of the coral reef environment including in-situ temperature (STR), seawater carbonate, net carbonate accretion (CAU), bioerosion (BMU), and cryptobiota diversity (ARMS). These data are archived separately.
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                orderingInstructions:  Contact NCEI for other distribution options and instructions.
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                description:  NCEI Accession 0159152 v1.1 was published.
                dateTime:
                  DateTime:  2017-02-06T22:22:08Z
            processStep:  (LE_ProcessStep)
                description:  NCEI Accession 0159145 v1.1 was published.
                dateTime:
                  DateTime:  2017-02-06T22:22:26Z
            processStep:  (LE_ProcessStep)
                description:  NCEI Accession 0159139 v1.1 was published.
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                  DateTime:  2017-02-07T14:00:39Z
            processStep:  (LE_ProcessStep)
                description:  NCEI Accession 0159155 v1.1 was published.
                dateTime:
                  DateTime:  2017-02-07T19:26:07Z
            processStep:  (LE_ProcessStep)
                description:  NCEI Accession 0187562 v1.1 was published.
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                  DateTime:  2019-04-19T13:40:28Z
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                description:  NCEI Accession 0202300 v1.1 was published.
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                  DateTime:  2019-09-18T12:35:10Z
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                description:  NCEI Accession 0202139 v1.1 was published.
                dateTime:
                  DateTime:  2019-09-18T12:39:46Z
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                description:  NCEI Accession 0239474 v1.1 was published.
                dateTime:
                  DateTime:  2021-07-30T19:21:12Z
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                description:  NCEI Accession 0289907 v1.1 was published.
                dateTime:
                  DateTime:  2024-03-19T20:54:22Z
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                code:  NOAA Ship Hi'ialakai
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