Microbiological Degradation (F059)
FILE TYPE 059 - MICROBIOLOGICAL DEGRADATION - 12/12/78 VERSION THIS FORMAT IS DESIGNED TO SUPPORT MICROBIOLOGICAL STUDIES OF BACTERIA, MICROBIOTA, AND FUNGI. THERE ARE TWELVE DATA RECORD TYPES USED TO REPORT CRUISE AND STATION INFORMATION, POSITION AND TIME, PHYSICAL, CHEMICAL AND ENVIRONMENTAL PARAMETERS, AND DATA RECORDS FOR THE MICROBIOLOGICAL STUDIES. EACH DATA RECORD IS 80 CHARACTERS IN LENGTH, SORTED BY STATION AND SEQUENCE NUMBERS TO MAINTAIN THE PROPER ORDER. THE FIRST NINE COLUMNS FOR ALL RECORDS ARE TO BE USED FOR FILE TYPE (COLUMNS 1-3) AND FILE IDENTIFIER (COLUMNS 4-9). THE FILE IDENTIFIER, TO BE ASSIGNED BY THE ORIGNATOR, IS A UNIQUE ORIGINATOR ID FOR EACH DATA SUBMISSION. AFTER SUBMISSION, THE NODC REASSIGNS TO THIS FIELD A UNIQUE NODC IDENTIFIER FOR INTERNAL USE. *****FILETYPE 059 - 12/27/79 - ADDED NEW PARAMETERS LAG TIME AND OIL *****CODE TO RECORD TYPE '5' FILE HEADER RECORD ALWAYS '1' 10 SAMPLING INTERVAL YY/MM/DD-YY/MM/DD BEGIN-END DATES 11 INVESTIGATOR/INSTITUTION 53-CHARACTER FIELD FOR RESPONSIBLE INSTITUTION OR INVESTIGATOR 28 STATION HEADER RECORD ALWAYS '2' 10 STATION NUMBER FIVE-CHARACTER STATION IDENTIFIER (FILE TYPE 100 STATION CODE MAY BE USED) 11 SAMPLE SITE NUMBER THREE-CHARACTER ORIGINATOR'S SAMPLE DESIGNATOR 16 DATE (GMT) YYMMDD 19 TIME (GMT) HHMM 25 LATITUDE DDMMSS PLUS HEMISPHERE 'N' OR 'S' 29 LONGITUDE DDDMMSS PLUS HEMISPHERE 'E' OR 'W' 36 WEATHER ONE-CHARACTER CODE - USE CODE 0108 44 WAVE HEIGHT ONE-CHARACTER CODE - USE CODE 0104 45 TEMPERATURE XXX NEGATIVE TEMPERATURES ARE PRECEDED BY A MINUS SIGN ADJACENT TO TEMPERATURE VALUE - DEG C TO TENTHS 46 SALINITY XXX - PARTS PER THOUSAND TO TENTHS 49 PH XXX - TO TENTHS 52 PH SCALE ONE-CHARACTER CODE - USE CODE 0183 55 DISSOLVED OXYGEN HABITAT XXX - PARTS PER MILLION TO TENTHS 56 WAVE ENERGY ONE-CHARACTER CODE - USE CODE 0280 59 SEDIMENT SIZE ONE-CHARACTER CODE - USE CODE 0281 60 SURFACE ORGANICS ONE-CHARACTER CODE - USE CODE 0282 61 BEACH SAMPLE TEMPERATURE XXX - DEGREES C TO TENTHS (TEMPERATURE OF SAND, SEDIMENT, AIR OR WATER) 62 DEPTH XXXXX - WATER DEPTH (METERS TO TENTHS) 65 BLANKS 70 SEQUENCE NUMBER XXX - ASCENDING NUMERIC 78 TEXT RECORD ALWAYS '3' 10 STATION NUMBER SEE RECORD '2' 11 SAMPLE SITE NUMBER SEE RECORD '2' 16 TEXT 59-CHARACTERS FOR TEXT 19 SEQUENCE NUMBER SEE RECORD '2' 78 DATA RECORD I ALWAYS '4' 10 STATION NUMBER SEE RECORD '2' 11 SAMPLE SITE NUMBER SEE RECORD '2' 16 SAMPLE TYPE ONE-CHARACTER CODE - USE CODE 0306 19 TREATMENT ONE-CHARACTER CODE - USE CODE 0305 20 INCUBATION TEMPERATURE XXX - DEGREES C TO TENTHS 21 INCUBATION TIME XXX - DAYS TO TENTHS 24 BACTERIAL DENSITY XXX - WHOLE NUMBER PER UNIT (SEE UNIT CODE 0338 IN STARTING COLUMN 77, THIS RECORD). 27 STANDARD DEVIATION XXX - FOR PLATE COUNT (TO TENTHS) 30 DILLUTION COUNTED SX - (S IS ALWAYS A MINUS '-' SIGN) 33 UNITS ONE-CHARACTER CODE - USE CODE 0338 35 PLATE COUNT #1 XXX - WHOLE NUMBER 36 PLATE COUNT #2 SEE ABOVE 39 PLATE COUNT #3 SEE ABOVE 42 PLATE COUNT #4 SEE ABOVE 45 PLATE COUNT #5 SEE ABOVE 48 H(2)S FROM SO(4) ONE-CHARACTER CODE - USE CODE 0339 51 H(2)S FROM SO(4) AND/OR SO(3) ONE-CHARACTER CODE - USE CODE 0339 52 KJELDAHL NITROGEN XXXX - UG/UNITS (UNITS FROM UNITS CODE 0338 STARTING COLUMN 35) 53 TOTAL PHOSPHORUS XXXX - UG/UNITS (SEE ABOVE) 57 TOTAL ORGANIC CARBON XXXX - UG/UNITS (SEE ABOVE) 61 SUSPENDED SOLIDS XXXSX - MG/L (THREE SIGNIFICANT FIGURES, IMPLIED DECIMAL POINT, SIGN '+' OR '-', AND EXPONENT) 65 AVAILABLE PHOSPHORUS XXXX - UG/UNITS (SEE ABOVE) 70 AVG SUBSAMPLE DEPTH XX - WHOLE CENTIMETERS 74 BLANK 76 UNIT FOR AVERAGE BACTERIAL DENSITY ONE-CHARACTER CODE - USE CODE 0338 77 SEQUENCE NUMBER SEE RECORD '2' 78 DATA RECORD II ALWAYS '5' 10 STATION NUMBER SEE RECORD '2' 11 SAMPLE SITE NUMBER SEE RECORD '2' 16 SAMPLE TYPE ONE-CHARACTER CODE - USE CODE 0306 19 TREATMENT ONE-CHARACTER CODE - USE CODE 0305 20 INCUBATION TEMPERATURE XXX - DEGREES C TO TENTHS 21 INCUBATION TIME XXX - DAYS TO TENTHS 24 INITIAL OIL CONCENTRATION XXXXX - MG/L TO TENTHS 27 DEGRADATION ONE-CHARACTER CODE - USE CODE 0303 32 MINERALIZATION XXXX - DETERMINED GRAVIMETRICALLY, PERCENT WEIGHT LOSS TO TENTHS (FLOAT SIGN IF NEGATIVE) 33 RATE XXXXX - MG/WEEK TO HUNDREDTHS 37 NITROGEN SUPPLEMENT XXX - TO HUNDREDTHS: CONCENTRATION OF NUTRIENTS AS GIVEN IS EQUAL TO CONCENTRATION TIMES THIS FACTOR. BLANK AND 100 ARE EQUIVALENT AND THE FACTOR EQUALS 1.00 (000 MEANS NO SUPPLEMENT) 42 PHOSPHORUS SUPPLEMENT XXX - SEE ABOVE 45 INCUBATION TEMPERATURE XXX - WITH RADIOACTIVE SUBSTRATE (DEGREES C TO TENTHS) 48 MINERALIZATION RATE XXXXX - WITH RADIOACTIVE SUBSTRATE, TO THOUSANDTHS: MG OF SELECTED COMPOUNDS/UNIT/DAY, WHERE UNIT (CODE 0340) IS IDENTIFIED IN COL. 56, THIS RECORD 51 UNIT ONE-CHARACTER CODE - USE CODE 0338 56 RADIOACTIVE SUBSTRATE ONE-CHARACTER CODE - USE CODE 0343 57 LAG TIME XXX - TIME PRIOR TO SIGNIFICANT C14O2 RELEASE DAYS TO TENTHS 58 OIL CODE THREE-CHARACTER CODE - USE CODE 0352 61 AVG SUBSAMPLE DEPTH XX - WHOLE CENTIMETERS 64 BLANKS 66 SEQUENCE SEE RECORD '2' 78 DATA RECORD III ALWAYS '6' 10 STATION NUMBER SEE RECORD '2' 11 SAMPLE SITE NUMBER SEE RECORD '2' 16 SAMPLE TYPE ONE-CHARACTER CODE - USE CODE 0306 19 TREATMENT ONE-CHARACTER CODE - USE CODE 0305 20 TAXONOMIC CODE TEN-DIGIT NODC TAXONOMIC CODE 21 NUMBER OF COLONIAL TYPES IN THIS GROUP XX 31 PERCENT OF AVERAGE DENSITY XX 33 TAXONOMIC CODE TEN-DIGIT NODC TAXONOMIC CODE 35 NUMBER OF COLONIAL TYPES IN THIS GROUP XX 45 PERCENT OF AVERAGE DENSITY XX 47 TAXONOMIC CODE TEN-DIGIT NODC TAXONOMIC CODE 49 NUMBER OF COLONIAL TYPES IN THIS GROUP XX 59 PERCENT OF AVERAGE DENSITY XX 61 TAXONOMIC CODE TEN-DIGIT NODC TAXONOMIC CODE 63 NUMBER OF COLONIAL TYPES IN THIS GROUP XX 73 PERCENT OF AVERAGE DENSITY XX 75 BLANK 77 SEQUENCE SEE RECORD '2' 78 DATA RECORD IV ALWAYS '7' 10 STATION NUMBER SEE RECORD '2' 11 SAMPLE SITE NUMBER SEE RECORD '2' 16 SAMPLE TYPE ONE-CHARACTER CODE - USE CODE 0306 19 TREATMENT ONE-CHARACTER CODE - USE CODE 0305 20 NUMBER OF COLONIAL TYPES WHICH COULD NOT BE CLASSIFIED XX 21 PERCENT OF AVERAGE DENSITY XX 23 NUMBER OF COLONIAL TYPES WHICH DID NOT SURVIVE FIRST TRANSFER XX 25 PERCENT OF AVERAGE DENSITY XX 27 BLANK 29 SEQUENCE NUMBER SEE RECORD '2' 78 DATA RECORD V ALWAYS '8' 10 STATION NUMBER SEE RECORD '2' 11 SAMPLE SITE NUMBER SEE RECORD '2' 16 SAMPLE TYPE ONE-CHARACTER CODE - USE CODE 0306 19 TREATMENT ONE-CHARACTER CODE - USE CODE 0305 20 SAMPLE DEPTH XXXXX - METERS TO TENTHS 21 SAMPLE TEMPERATURE XXX NEGATIVE TEMPERATURES ARE PRECEDED BY A MINUS SIGN ADJACENT TO TEMPERATURE VALUE - DEG C TO TENTHS 26 PH XXXX - TO HUNDREDTHS 29 EH XXXX - MILLIVOLTS 33 PERCENT MOISTURE XXX - SEDIMENT SAMPLES (TO TENTHS) 37 ATP CONCENTRATION XXXXXX - NANOGRAMS TO TENTHS (NOTE: PER LITER FOR WATER SAMPLE; PER GRAM DRY WEIGHT FOR SEDIMENT SAMPLE) 40 GLYCOLIC ACID XXXX - MICROGRAMS TO TENTHS (SEE ABOVE NOTE) 46 UREA XXXXX - MICROGRAMS TO HUNDREDTHS (SEE ABOVE NOTE) 50 CORE LENGTH XXX - SEDIMENT CORE (CM TO TENTHS) 55 DRY WEIGHT SEDIMENT XXXXXX - GRAMS/ML UNDILUTED SEA WATER TO TEN THOUSANDTHS 58 TOTAL ORGANIC NITROGEN XXXXXX - MG/G TO TEN-THOUSANDTHS (DRY WEIGHT) 64 TOTAL ORGANIC CARBON XXXXXX - SAME AS ABOVE 70 BLANKS 76 SEQUENCE NUMBER SEE RECORD '2' 78 DATA RECORD VI ALWAYS '9' 10 STATION NUMBER SEE RECORD '2' 11 SAMPLE SITE NUMBER SEE RECORD '2' 16 SAMPLE TYPE ONE-CHARACTER CODE - USE CODE 0306 19 TREATMENT ONE-CHARACTER CODE - USE CODE 0305 20 SAMPLE DEPTH XXXXX - METERS TO TENTHS 21 LOG OF DIRECT COUNTS PER ML UNDILUTED XXXXXXXX - TO MILLIONTHS 26 PERCENT COCCI XXX - TO TENTHS 34 PERCENT SHORT RODS XXX - TO TENTHS 37 PERCENT LONG RODS XXX - TO TENTHS 40 PERCENT SPIRALS XXX - TO TENTHS 43 PERCENT COCCOBACILLARY XXX - TO TENTHS 46 PERCENT FILAMENTS XXX - TO TENTHS 49 PERCENT OTHERS XXX - TO TENTHS 52 BLANKS 55 SEQUENCE NUMBER SEE RECORD '2' 78 DATA RECORD VII ALWAYS 'A' 10 STATION NUMBER SEE RECORD '2' 11 SAMPLE SITE NUMBER SEE RECORD '2' 16 SAMPLE TYPE ONE-CHARACTER CODE - USE CODE 0306 19 TREATMENT ONE-CHARACTER CODE - USE CODE 0305 20 SAMPLE DEPTH XXXXX - METERS TO TENTHS 21 MEDIUM TWO-CHARACTER CODE - USE CODE 0304 26 INCUBATION TYPE ONE-CHARACTER CODE - USE CODE 0341 28 INCUBATION TIME XX - WHOLE DAYS 29 INCUBATION TEMPERATURE XX - DEGREE C 31 AVERAGE LOG OF COLONY FORMING UNITS PER ML UNDILUTED XXXXXX - TO TEN THOUSANDTHS 33 AVERAGE LOG OF PIGMENTED COLONIES PER ML UNDILUTED XXXXXX - TO TEN THOUSANDTHS 39 AVERAGE LOG OF NON- PIGMENTED COLONIES PER ML UNDILUTED XXXXXX - TO TEN THOUSANDTHS 45 AVERAGE LOG OF FUNGI PER ML UNDILUTED XXXXXX - TO TEN THOUSANDTHS 51 AVERAGE LOG OF ACTINOMYCETE-LIKE PER ML UNDILUTED XXXXXX - TO TEN THOUSANDTHS 57 NUMBER OF REPLICATES IN AVERAGE XX 63 BLANKS 65 SEQUENCE NUMBER SEE RECORD '2' 78 DATA RECORD VIII ALWAYS 'B' 10 STATION NUMBER SEE RECORD '2' 11 SAMPLE SITE NUMBER SEE RECORD '2' 16 SAMPLE TYPE ONE-CHARACTER CODE - USE CODE 0306 19 TREATMENT ONE-CHARACTER CODE - USE CODE 0305 20 SAMPLE DEPTH XXXXX - METERS TO TENTHS 21 TYPE OF KINETICS ONE-CHARACTER CODE - USE CODE 0342 26 MEDIUM TWO-CHARACTER CODE - USE CODE 0304 27 MEDIUM CONCENTRATION XXXXX - NANOMOLES TO THOUSANDTHS 29 INCUBATION TIME XXXXX - HOURS TO THOUSANDTHS 34 INCUBATION TIME/FRACTION OF MEDIUM USED XXXXXX - HOURS TO THOUSANDTHS 39 TURNOVER TIME XXXXXX - HOURS TO HUNDREDTHS 45 TRANSPORT CONSTANT PLUS NATURAL MEDIUM CONC. XXXXXX - NANOMOLES TO HUNDREDTHS 51 MEDIUM CONSUMPTION RATE XXXXXX - MAXIMUM (NANOMOLES/HOUR TO HUNDREDTHS) 57 NATURAL MEDIUM (SUBSTRATE) CONCENTRATION XXXXXX - IN SITU (NANOMOLES TO HUNDREDTHS) 63 UPTAKE RATE XXXXXX - NANOMOLES/HOUR TO HUNDREDTHS 69 CORRELATION COEFFICIENT XXX - TO THOUSANDTHS 75 SEQUENCE NUMBER SEE RECORD '2' 78 DATA RECORD IX ALWAYS 'C' 10 STATION NUMBER SEE RECORD '2' 11 SAMPLE SITE NUMBER SEE RECORD '2' 16 SAMPLE TYPE ONE-CHARACTER CODE - USE CODE 0306 19 TREATMENT ONE-CHARACTER CODE - USE CODE 0305 20 INCUBATION TEMPERATURE XXX - DEGREES C TO TENTHS 21 INCUBATION TIME XXX - DAYS TO TENTHS 24 AVERAGE FUNGAL DENSITY XXX - WHOLE NUMBER PER UNIT (SEE UNIT CODE 0338 IN STARTING COLUMN 77, THIS RECORD). 27 STANDARD DEVIATION XXX - FOR PLATE COUNT (TO TENTHS) 30 DILLUTION COUNTED SX - (S IS ALWAYS A MINUS '-' SIGN) 33 UNITS ONE-CHARACTER CODE - USE CODE 0338 35 PLATE COUNT #1 XXX - WHOLE NUMBER 36 PLATE COUNT #2 SEE ABOVE 39 PLATE COUNT #3 SEE ABOVE 42 PLATE COUNT #4 SEE ABOVE 45 PLATE COUNT #5 SEE ABOVE 48 AMMONIA - N XXXX - UG/UNITS (UNITS FROM UNITS CODE 0338 STARTING COLUMN 35) 51 NITRATE - N XXXX - UG/UNITS (SEE ABOVE) 55 GREASE AND OIL XXXX - UG/UNITS (SEE ABOVE) 59 TOTAL ORTHOPHOSPHATE - P XXXX - UG/UNITS (SEE ABOVE) 63 BLANKS 67 UNIT FOR AVERAGE FUNGAL DENSITY ONE-CHARACTER CODE - USE CODE 0338 77 SEQUENCE NUMBER SEE RECORD '2' 78