Marine Invertebrate Pathology (F063)
FILE TYPE 063 - MARINE INVERTEBRATE PATHOLOGY - 3/5/79 VERSION THIS FORMAT IS DESIGNED TO SUPPORT STUDIES ON DISEASED MARINE INVERTEBRATES. DETAILED INFORMATION CONCERNING LESION LOCATIONS AND FREQUENCY, GENERALLY IS OBTAINED FOLLOWING LABORATORY ANALYSES, ALTHOUGH FIELD OBSERVATIONS CAN BE REPORTED IN THIS FORMAT. THE FORMAT CONSISTS OF NINE RECORDS FOR REPORTING CRUISE AND STATION DATA, GEAR TYPE AND OPERATING INFORMATION, BOTTOM DEPTH AND ENVIRONMENTAL DATA, SIZE, WEIGHT AND NUMBER OF INDIVIDUALS FOR BOTH TOTAL HAULS AND SUBSAMPLES AND DETAILED MEASUREMENTS FOR INDIVIDUAL SPECIMEN INCLUDING SEX, LENGTH, WEIGHT AND LOCATIONS AND DESCRIPTIONS OF ANY LESIONS PRESENT. A TEXT RECORD ALSO IS AVAILABLE. RECORD TYPES '6' AND '7' HAVE IDENTICAL PARAMETERS TO RECORDS '3', '4' AND '5' BUT ALLOW FOR THE USE OF THE 12-DIGIT NODC TAXONOMIC CODES. ALL RECORDS IN THIS FORMAT ARE 80 COLUMNS IN LENGTH. THIS FILE IS SORTED IN ORDER BY STATION NUMBER (CRUISE AND HAUL OR SET NUMBER) AND SEQUENCE NUMBER TO OBTAIN THE PROPER SEQUENCE OF RECORDS. THE FIRST NINE COLUMNS FOR ALL RECORDS ARE TO BE USED FOR FILE TYPE (COLUMNS 1-3) AND FILE IDENTIFIER (COLUMNS 4-9). THE FILE IDENTIFIER, TO BE ASSIGNED BY THE ORIGNATOR, IS A UNIQUE ORIGINATOR ID FOR EACH DATA SUBMISSION. AFTER SUBMISSION, THE NODC REASSIGNS TO THIS FIELD A UNIQUE NODC IDENTIFIER FOR INTERNAL USE. ***NEW PRINCIPLE INVESTIGATORS SHOULD USE RECORD TYPES '6', '7' AND '8' WHICH REPLACE RECORDS '3', '4' AND '5'. FILE HEADER RECORD ALWAYS '1' 10 VESSEL 11-CHARACTER FIELD FOR VESSEL NAME 11 CRUISE OR LEG NUMBER 6-CHARACTER FIELD FOR CRUISE OR LEG NUMBER - ASSIGNED BY THE ORIGINATOR 22 BEGIN CRUISE DATE (GMT) MM/DD/YY- 28 END CRUISE DATE (GMT) MM/DD/YY 37 SENIOR SCIENTIST 19-CHARACTER FIELD FOR SCIENTIST NAME 45 INVESTIGATOR/INSTITUTION 17-CHARACTER FIELD FOR INVESTIGATOR OR INSTITUTION NAME 64 STATION HEADER RECORD ALWAYS '2' 10 STATION NUMBER 5-CHARACTER FIELD CONSISTING OF 2 CHARACTER FIELD NUMBER AND 3 CHARACTER STATION NUMBER ASSIGNED BY THE ORIGINATOR - ALSO INCLUDED IN RECORDS 3, 4 AND 5 11 LATITUDE DDMMSS PLUS HEMISPHERE 'N' OR 'S' 16 LONGITUDE DDDMMSS PLUS HEMISPHERE 'E' OR 'W' 23 DATE (GMT) YYMMDD 31 TIME (GMT) XXXX (HOURS AND MINUTES) 37 GEAR TYPE TWO-CHARACTER CODE - USE CODE 0129 41 DURATION OF FISHING XXX (HOURS TO TENTHS) 43 DISTANCE FISHED XXX (KILOMETERS TO TENTHS) 46 SURFACE TEMPERATURE XXX - NEGATIVE TEMPERATURE PRECEDED BY A MINUS SIGN ADJACENT TO THE TEMPERATURE VALUE - (DEG CENTIGRADE TO TENTHS) 49 WATER TEMPERATURE AT GEAR LEVEL XXX - SAME AS ABOVE 52 AVERAGE DEPTH OF BOTTOM DURING TOWING XXXX (WHOLE METERS) 55 BOTTOM TYPE TWO-CHARACTER CODE - USE CODE 0077 59 BOTTOM TRAWL TYPE TWO-CHARACTER CODE - USE CODE 0076 61 BLANKS 63 SEQUENCE NUMBER XX - ASCENDING NUMERICS USED TO SORT RECORDS WITHIN A STATION - ALSO INCLUDED IN RECORDS 3,4 AND 5 76 BLANKS 78 SPECIES CATCH RECORD 1 ALWAYS '3' 10 'STATION NUMBER' SEE RECORD '2' 11 TAXONOMIC CODE TEN-CHARACTER CODE - USE NODC TAXONOMIC CODES - THIS FIELD ORIGINALLY DESIGNED FOR EARLIER ALASKAN CODE - SEE RECORD '6' FOR 12-DIGIT FIELD 16 TOTAL WEIGHT OF SPECIES XXXXXXXX (WHOLE GRAMS) 26 WEIGHT DETERMINATION ONE-CHARACTER CODE - USE CODE 0161 34 TOTAL NUMBER XXXXXX - TOTAL NUMBER OF ONE SPECIES IN A HAUL 35 NUMBER DETERMINATION ONE-CHARACTER CODE - USE CODE 0162 41 ORIGINATOR'S SPECIES INITIALS TWO-CHARACTER CODE ASSIGNED BY THE ORIGINATOR'S INTERNAL CODE OR INCLUDED IN DOCUMENTATION 42 WEIGHT OF SUBSAMPLE XXXXX (WHOLE GRAMS) 44 NUMBER IN SUBSAMPLE XXX 49 SEX ONE-CHARACTER CODE - USE CODE 0101 52 NUMBER EXAMINED XXX - NUMBER OF INDIVIDUALS EXAMINED - CORRESPONDS TO NUMBER OF INDIVIDUAL RECORDS FOLLOWING 53 DISEASE #1, DISEASE CONDITION TWO-CHARACTER CODE - USE CODE 0238 56 INDIVIDUALS AFFECTED XX - NUMBER OF INDIVIDUALS 58 DISEASE #2, DISEASE CONDITION TWO-CHARACTER CODE - USE CODE 0238 60 INDIVIDUALS AFFECTED XX - NUMBER OF INDIVIDUALS 62 DISEASE #3, DISEASE CONDITION TWO-CHARACTER CODE - USE CODE 0238 64 INDIVIDUALS AFFECTED XX - NUMBER OF INDIVIDUALS 66 DISEASE #4, DISEASE CONDITION TWO-CHARACTER CODE - USE CODE 0238 68 INDIVIDUALS AFFECTED XX - NUMBER OF INDIVIDUALS 70 DISEASE #5, DISEASE CONDITION TWO-CHARACTER CODE - USE CODE 0238 72 INDIVIDUALS AFFECTED XX - NUMBER OF INDIVIDUALS 74 SEQUENCE NUMBER XX - SEE RECORD '2' 76 ORIGINATOR'S STATION CODE THREE-CHARACTER CODE ASSIGNED BY THE ORIGINATOR'S INTERNAL CODE OR INCLUDED IN DOCUMENTATION 78 INDIVIDUAL RECORD 1 ALWAYS '4' 10 'STATION NUMBER' SEE RECORD '2' 11 ORIGINATOR'S SPECIMEN NUMBER FOUR-CHARACTER FIELD ASSIGNED BY THE ORIGINATOR 16 TAXONOMIC CODE TEN-CHARACTER CODE - USE NODC TAXONOMIC CODES - THIS FIELD ORIGINALLY DESIGNED FOR EARLIER ALASKAN CODE - SEE RECORD '7' FOR 12-DIGIT FIELD 20 SEX ONE-CHARACTER CODE - USE CODE 0101 30 SEX MATURITY ONE-CHARACTER CODE - USE CODE 0091 31 LENGTH OF INDIVIDUAL XXXX (WHOLE MILLIMETERS) 32 INVERTEBRATE LENGTH ONE-CHARACTER CODE - USE CODE 0239 36 WEIGHT OF INDIVIDUAL XXXXXX (WHOLE GRAMS) 37 WEIGHT DETERMINATION ONE-CHARACTER CODE - USE CODE 0163 43 PHOTOS TAKEN ONE-CHARACTER CODE - USE CODE 0117 44 SAMPLE CODE ONE-CHARACTER CODE - USE CODE 0241 45 PRESERVATIVE ONE-CHARACTER CODE - USE CODE 0242 46 DISEASE CONDITION TWO-CHARACTER CODE - USE CODE 0238 47 FREQUENCY CODE TWO-CHARACTER CODE - USE CODE 0246 49 LESION #1 - GENERAL LOCATION TWO-CHARACTER CODE - USE CODE 0247 51 APPENDAGE TWO-CHARACTER CODE - USE CODE 0248 53 SPECIFIC LOCATION ONE-CHARACTER CODE - USE CODE 0249 55 LENGTH XX - LENGTH OF LESION (MILLIMETERS) 56 WIDTH XX - WIDTH OF LESION (MILLIMETERS) 58 COVERAGE ONE-CHARACTER CODE - USE CODE 0250 60 LESION #2 - GENERAL LOCATION TWO-CHARACTER CODE - USE CODE 0247 61 APPENDAGE TWO-CHARACTER CODE - USE CODE 0248 63 SPECIFIC LOCATION ONE-CHARACTER CODE - USE CODE 0249 65 LENGTH XX - LENGTH OF LESION (MILLIMETERS) 66 WIDTH XX - WIDTH OF LESION (MILLIMETERS) 68 COVERAGE ONE-CHARACTER CODE - USE CODE 0250 70 BLANKS 71 SEQUENCE NUMBER SEE RECORD '3' 76 ORIGINATOR'S STATION CODE SEE RECORD '3' 78 SUPPLEMENTARY LESION RECORD ALWAYS '5' - TO BE USED TO DESCRIBE ADDITIONAL LESIONS FOR SPECIMEN NUMBER INDICATED ON RECORD '4'. ADDITIONAL RECORD '5'S MAY BE USED FOR LESIONS 8, 9, ETC 10 'STATION NUMBER' SEE RECORD '2' 11 ORIGINATOR'S SPECIMEN NUMBER SEE RECORD '4' 16 DISEASE CONDITION TWO-CHARACTER CODE - USE CODE 0238 20 FREQUENCY TWO-CHARACTER CODE - USE CODE 0246 22 LESION #3 - GENERAL LOCATION TWO-CHARACTER CODE - USE CODE 0247 24 APPENDAGE TWO-CHARACTER CODE - USE CODE 0248 26 SPECIFIC LOCATION ONE-CHARACTER CODE - USE CODE 0249 28 LENGTH XX - LENGTH OF LESION (MILLIMETERS) 29 WIDTH XX - WIDTH OF LESION (MILLIMETERS) 31 COVERAGE ONE-CHARACTER CODE - USE CODE 0250 33 LESION #4 - GENERAL LOCATION TWO-CHARACTER CODE - USE CODE 0247 34 APPENDAGE TWO-CHARACTER CODE - USE CODE 0248 36 SPECIFIC LOCATION ONE-CHARACTER CODE - USE CODE 0249 38 LENGTH XX - LENGTH OF LESION (MILLIMETERS) 39 WIDTH XX - WIDTH OF LESION (MILLIMETERS) 41 COVERAGE ONE-CHARACTER CODE - USE CODE 0250 43 LESION #5 - GENERAL LOCATION TWO-CHARACTER CODE - USE CODE 0247 44 APPENDAGE TWO-CHARACTER CODE - USE CODE 0248 46 SPECIFIC LOCATION ONE-CHARACTER CODE - USE CODE 0249 48 LENGTH XX - LENGTH OF LESION (MILLIMETERS) 49 WIDTH XX - WIDTH OF LESION (MILLIMETERS) 51 COVERAGE ONE-CHARACTER CODE - USE CODE 0250 53 LESION #6 - GENERAL LOCATION TWO-CHARACTER CODE - USE CODE 0247 54 APPENDAGE TWO-CHARACTER CODE - USE CODE 0248 56 SPECIFIC LOCATION ONE-CHARACTER CODE - USE CODE 0249 58 LENGTH XX - LENGTH OF LESION (MILLIMETERS) 59 WIDTH XX - WIDTH OF LESION (MILLIMETERS) 61 COVERAGE ONE-CHARACTER CODE - USE CODE 0250 63 LESION #7 - GENERAL LOCATION TWO-CHARACTER CODE - USE CODE 0247 64 APPENDAGE TWO-CHARACTER CODE - USE CODE 0248 66 SPECIFIC LOCATION ONE-CHARACTER CODE - USE CODE 0249 68 LENGTH XX - LENGTH OF LESION (MILLIMETERS) 69 WIDTH XX - WIDTH OF LESION (MILLIMETERS) 71 COVERAGE ONE-CHARACTER CODE - USE CODE 0250 73 BLANKS 74 SEQUENCE NUMBER SEE RECORD '3' 76 ORIGINATOR'S STATION CODE SEE RECORD '3' 78 SPECIES CATCH RECORD 2 ALWAYS '6' - THIS RECORD IS SIMILAR TO RECORD '3' BUT IS DESIGNED TO ACCOMODATE THE NODC 12-DIGIT TAXONOMIC CODE. ALL FIELDS FOLLOWING THE TAXONOMIC CODE ARE SHIFTED TWO COLUMNS TO THE RIGHT. INFORMATION ON MORE THAN FOUR DISEASES PER SUBSAMPLE SHOULD BE REPORTED IN THE TEXT RECORD (RECORD TYPE '8') 10 'STATION NUMBER' SEE RECORD '2' 11 TAXONOMIC CODE TWELVE-CHARACTER CODE - USE NODC TAXONOMIC CODES 16 TOTAL WEIGHT OF SPECIES XXXXXXXX (WHOLE GRAMS) 28 WEIGHT DETERMINATION ONE-CHARACTER CODE - USE CODE 0161 36 TOTAL NUMBER XXXXXX - TOTAL NUMBER OF ONE SPECIES IN A HAUL 37 NUMBER DETERMINATION ONE-CHARACTER CODE - USE CODE 0162 43 ORIGINATOR'S SPECIES INITIALS TWO-CHARACTER CODE ASSIGNED BY THE ORIGINATOR'S INTERNAL CODE OR INCLUDED IN DOCUMENTATION 44 WEIGHT OF SUBSAMPLE XXXXX (WHOLE GRAMS) 46 NUMBER IN SUBSAMPLE XXX 51 SEX ONE-CHARACTER CODE - USE CODE 0101 54 NUMBER EXAMINED XXX - NUMBER OF INDIVIDUALS EXAMINED - CORRESPONDS TO NUMBER OF INDIVIDUAL RECORDS FOLLOWING 55 DISEASE #1, DISEASE CONDITION TWO-CHARACTER CODE - USE CODE 0238 58 INDIVIDUALS AFFECTED XX - NUMBER OF INDIVIDUALS 60 DISEASE #2, DISEASE CONDITION TWO-CHARACTER CODE - USE CODE 0238 62 INDIVIDUALS AFFECTED XX - NUMBER OF INDIVIDUALS 64 DISEASE #3, DISEASE CONDITION TWO-CHARACTER CODE - USE CODE 0238 66 INDIVIDUALS AFFECTED XX - NUMBER OF INDIVIDUALS 68 DISEASE #4, DISEASE CONDITION TWO-CHARACTER CODE - USE CODE 0238 70 INDIVIDUALS AFFECTED XX - NUMBER OF INDIVIDUALS 72 BLANKS 74 SEQUENCE NUMBER XX - SEE RECORD '2' 76 ORIGINATOR'S STATION CODE THREE-CHARACTER CODE ASSIGNED BY THE ORIGINATOR'S INTERNAL CODE OR INCLUDED IN DOCUMENTATION 78 INDIVIDUAL RECORD 2 ALWAYS '7' - THIS RECORD IS SIMILAR TO RECORD '4' BUT IS DESIGNED TO ACCOMODATE THE NODC 12-DIGIT TAXONOMIC CODE. ALL FIELDS FOLLOWING THE TAXONOMIC CODE ARE SHIFTED TWO COLUMNS TO THE RIGHT 10 'STATION NUMBER' SEE RECORD '2' 11 ORIGINATOR'S SPECIMEN NUMBER FOUR-CHARACTER FIELD ASSIGNED BY THE ORIGINATOR 16 TAXONOMIC CODE TWELVE-CHARACTER CODE - USE NODC TAXONOMIC CODES 20 SEX ONE-CHARACTER CODE - USE CODE 0101 32 SEX MATURITY ONE-CHARACTER CODE - USE CODE 0091 33 LENGTH OF INDIVIDUAL XXXX (WHOLE MILLIMETERS) 34 INVERTEBRATE LENGTH ONE-CHARACTER CODE - USE CODE 0239 38 WEIGHT OF INDIVIDUAL XXXXXX (WHOLE GRAMS) 39 WEIGHT DETERMINATION ONE-CHARACTER CODE - USE CODE 0163 45 PHOTOS TAKEN ONE-CHARACTER CODE - USE CODE 0117 46 SAMPLE CODE ONE-CHARACTER CODE - USE CODE 0241 47 PRESERVATIVE ONE-CHARACTER CODE - USE CODE 0242 48 DISEASE CONDITION TWO-CHARACTER CODE - USE CODE 0238 49 FREQUENCY CODE TWO-CHARACTER CODE - USE CODE 0246 51 LESION #1 - GENERAL LOCATION TWO-CHARACTER CODE - USE CODE 0247 53 APPENDAGE TWO-CHARACTER CODE - USE CODE 0248 55 SPECIFIC LOCATION ONE-CHARACTER CODE - USE CODE 0249 57 LENGTH XX - LENGTH OF LESION (MILLIMETERS) 58 WIDTH XX - WIDTH OF LESION (MILLIMETERS) 60 COVERAGE ONE-CHARACTER CODE - USE CODE 0250 62 LESION #2 - GENERAL LOCATION TWO-CHARACTER CODE - USE CODE 0247 63 APPENDAGE TWO-CHARACTER CODE - USE CODE 0248 65 SPECIFIC LOCATION ONE-CHARACTER CODE - USE CODE 0249 67 LENGTH XX - LENGTH OF LESION (MILLIMETERS) 68 WIDTH XX - WIDTH OF LESION (MILLIMETERS) 70 COVERAGE ONE-CHARACTER CODE - USE CODE 0250 72 BLANKS 73 SEQUENCE NUMBER SEE RECORD '3' 76 ORIGINATOR'S STATION CODE SEE RECORD '3' 78 SUPPLEMENTARY LESION RECORD ALWAYS '8' - TO BE USED TO DESCRIBE ADDITIONAL LESIONS FOR SPECIMEN NUMBER INDICATED ON RECORD '7'. ADDITIONAL RECORD '8'S MAY BE USED FOR LESIONS 8, 9, ETC 10 'STATION NUMBER' SEE RECORD '2' 11 ORIGINATOR'S SPECIMEN NUMBER SEE RECORD '4' 16 DISEASE CONDITION TWO-CHARACTER CODE - USE CODE 0238 20 FREQUENCY TWO-CHARACTER CODE - USE CODE 0246 22 LESION #3 - GENERAL LOCATION TWO-CHARACTER CODE - USE CODE 0247 24 APPENDAGE TWO-CHARACTER CODE - USE CODE 0248 26 SPECIFIC LOCATION ONE-CHARACTER CODE - USE CODE 0249 28 LENGTH XX - LENGTH OF LESION (MILLIMETERS) 29 WIDTH XX - WIDTH OF LESION (MILLIMETERS) 31 COVERAGE ONE-CHARACTER CODE - USE CODE 0250 33 LESION #4 - GENERAL LOCATION TWO-CHARACTER CODE - USE CODE 0247 34 APPENDAGE TWO-CHARACTER CODE - USE CODE 0248 36 SPECIFIC LOCATION ONE-CHARACTER CODE - USE CODE 0249 38 LENGTH XX - LENGTH OF LESION (MILLIMETERS) 39 WIDTH XX - WIDTH OF LESION (MILLIMETERS) 41 COVERAGE ONE-CHARACTER CODE - USE CODE 0250 43 LESION #5 - GENERAL LOCATION TWO-CHARACTER CODE - USE CODE 0247 44 APPENDAGE TWO-CHARACTER CODE - USE CODE 0248 46 SPECIFIC LOCATION ONE-CHARACTER CODE - USE CODE 0249 48 LENGTH XX - LENGTH OF LESION (MILLIMETERS) 49 WIDTH XX - WIDTH OF LESION (MILLIMETERS) 51 COVERAGE ONE-CHARACTER CODE - USE CODE 0250 53 LESION #6 - GENERAL LOCATION TWO-CHARACTER CODE - USE CODE 0247 54 APPENDAGE TWO-CHARACTER CODE - USE CODE 0248 56 SPECIFIC LOCATION ONE-CHARACTER CODE - USE CODE 0249 58 LENGTH XX - LENGTH OF LESION (MILLIMETERS) 59 WIDTH XX - WIDTH OF LESION (MILLIMETERS) 61 COVERAGE ONE-CHARACTER CODE - USE CODE 0250 63 LESION #7 - GENERAL LOCATION TWO-CHARACTER CODE - USE CODE 0247 64 APPENDAGE TWO-CHARACTER CODE - USE CODE 0248 66 SPECIFIC LOCATION ONE-CHARACTER CODE - USE CODE 0249 68 LENGTH XX - LENGTH OF LESION (MILLIMETERS) 69 WIDTH XX - WIDTH OF LESION (MILLIMETERS) 71 COVERAGE ONE-CHARACTER CODE - USE CODE 0250 73 BLANKS 74 SEQUENCE NUMBER SEE RECORD '3' 76 ORIGINATOR'S STATION CODE SEE RECORD '3' 78 TEXT RECORD ALWAYS '9' 10 'STATION NUMBER' SEE RECORD '2' 11 TEXT 60-CHARACTER FIELD FOR COMMENTS OR ADDITIONAL DISEASE INFORMATION 16 SEQUENCE NUMBER SEE RECORD '3' 76 ORIGINATOR'S STATION CODE SEE RECORD '3' 78